Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1233 ATGACCATGCTACCTCAGACATTTACTATGATTGCAACAACACTCATTGTTCTTGCACAAACACTTGTGGTGGTGAATTCACTTCCTGAAGCTGATAAAATAACCAATTTGCCAGGGCAGCCACAGGTCAATTTTCAGCAATATTCTGGTTACGTTACTGTGGATGATAAACATCAAAGAGCTTTGTTTTACTACTTTGTTGAAGCTGAAGAAGACCCTTCTTCCAAACCATTAGTCCTCTGGTTGAATGGAGGGCCTGGTTGTTCATCGGTTGGAGTTGGAGCTTTTTCTGAGCATGGTCCTTTCAGACCAAGTGACAACAATGTTCTTGAGAAAAATTATTATAGTTGGAACAAAGTGGCAAATGTGCTATACTTGGAATCACCAGCTGGTGTTGGATTCTCTTACTCTAGCAATAAATCTTTCTATGCCTTAGTGACAGATGAGATTACAGCTAGGGATAGTCTTGTTTTCCTACAGCGTTGGTTCACTGAATTCCCTGAGTACTCAAACAACGAATTCTTCATCACAGGGGAGAGCTATGGAGGTCACTATGTTCCACAACTTGCGCAACTTATTGTTCAAACCAAGAGCAACTTCAATCTCAAGGGAATAGCAATAGGGAATCCTCTTCTCGAATTTAATACTGATTTCAACTCAAGATCTGAGTACTTCTGGTCTCATGGACTTATATCAGATTCAACATACGAAGTCTTAACTAAAGTATGCAACTATTCCTCAATTAGGAGAGAAATTCAAAATGGGAATCTTAGAGGGGTTTGTGAAAAAGCAATTAAGCTATTGGAAACTGAGATTAGCAACTATGTAGATGAATATGATGTCACTATCGATGTTTGTTTGTCATCAGTAAATCAACAGGCCTATGTGCTTAATAAACTGCAAGAGACACAGAAGATAGATGTTTGTATTGGTGATAAAACAATCACATACTTGAACAGAAAAGAAGTCCAAGAAGCTTTGCATGCTAAACTTGTTGGAGTCACAAAATGGTCAACTTGCAGCCCAGTTCTGCATTATGACTATCAGAATCTAGAAATACCAACAATTCCTATTCTAGGGTCACTTGTTAAGTCTGGCATCAAGGTTCTAGTATACAGTGGAGATCAAGATTCAGTGATTCCATTAATAGGTTCGCGATCTCTAGTGTACAAATTAGCCAAGGAAATTGGACTTGATACAACAGTGGCCTATAGAACTTGGTTTGAGAAAAAACAGGTAGCAGGGTGGACACAAGTATATGGGGACATCTTATCATATGCCACTATAAGAGGAGCATCTCATGAAGCTCCCTTCACTCAACCGCAGAGATCACTGGTGTTACTAAAAGCATTTCTGGAAGGAAAACCACTACCTGCTGTTATGTAA 1386 0.3918 MTMLPQTFTMIATTLIVLAQTLVVVNSLPEADKITNLPGQPQVNFQQYSGYVTVDDKHQRALFYYFVEAEEDPSSKPLVLWLNGGPGCSSVGVGAFSEHGPFRPSDNNVLEKNYYSWNKVANVLYLESPAGVGFSYSSNKSFYALVTDEITARDSLVFLQRWFTEFPEYSNNEFFITGESYGGHYVPQLAQLIVQTKSNFNLKGIAIGNPLLEFNTDFNSRSEYFWSHGLISDSTYEVLTKVCNYSSIRREIQNGNLRGVCEKAIKLLETEISNYVDEYDVTIDVCLSSVNQQAYVLNKLQETQKIDVCIGDKTITYLNRKEVQEALHAKLVGVTKWSTCSPVLHYDYQNLEIPTIPILGSLVKSGIKVLVYSGDQDSVIPLIGSRSLVYKLAKEIGLDTTVAYRTWFEKKQVAGWTQVYGDILSYATIRGASHEAPFTQPQRSLVLLKAFLEGKPLPAVM 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1233 461 SUPERFAMILY alpha/beta-Hydrolases 34 458 IPR029058 -
Aed7g1233 461 Gene3D - 355 454 - -
Aed7g1233 461 Pfam Serine carboxypeptidase 38 454 IPR001563 GO:0004185|GO:0006508
Aed7g1233 461 ProSitePatterns Serine carboxypeptidases, serine active site. 176 183 IPR018202 GO:0004185
Aed7g1233 461 ProSitePatterns Serine carboxypeptidases, histidine active site. 424 441 IPR033124 GO:0004185
Aed7g1233 461 Gene3D alpha/beta hydrolase 29 288 IPR029058 -
Aed7g1233 461 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 10 459 IPR001563 GO:0004185|GO:0006508
Aed7g1233 461 PANTHER CARBOXYPEPTIDASE 10 459 - -
Aed7g1233 461 Gene3D - 309 345 - -
Aed7g1233 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 187 IPR001563 GO:0004185|GO:0006508
Aed7g1233 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 136 IPR001563 GO:0004185|GO:0006508
Aed7g1233 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 424 437 IPR001563 GO:0004185|GO:0006508
Aed7g1233 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 125 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1233 Aed-Chr7 9991724 9994657 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1233 317 457 Calmodulin-binding Proteins AT2G22960 31.206 2.38e-19 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1233 K16297 - gmx:100799900 842.417