Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1232 ATGTTTCCCCAGCCATGGATATTATTGTTCTTGATAGCCATAACAACTTCACTACTCTTCATGTTCTCACTGGTTAAGTCATTTCCAGAAGCTGATAAGGTGAAATCCTTGCCTGGACAGTCGTCACCTGTTTCCTTCCAACAATTTGCTGGCTATGTTGCTGTTGATGACATGAATCAGAGAGCTCTTTTTTACTACTTTGTTGAAGCACAAATCAACCCTGCTTCTAAGCCTCTACTTCTCTGGCTTAATGGAGGGCCTGGCTGTACATCTGTTGGAGTTGGAGCCTTCACAGAACATGGTCCTTTTGTTACAAATCAAGGAGAGGCTATTGAGAAAAATCAGTATAGTTGGAACAAAGGTGCTGCAAATTTCAAAAGCCTTATTATATTATCTCTTTGCCACAACAAACTAAAACTAAGATCAGTCCTTTCTTTCGCAGAGGCAAACATTTTGTATCTAGATTCACCAGCAGGTGTTGGATTCTCTTACTCTCTCAATTTGTCATTTTATAAAACACTGAACGATGAAGTCACAGCCCGAGACAGTCTGGTTTTCCTGCAGCGCTGGTTTGCCAAGTTCCCAGAATACAAGAATAGAGATTTCTATATAATGGGAGAGAGTTATGGAGGTCACTATGTACCTCAACTTGCTGAACTCATTATTAAGAGTAAAGTGAATTTCAACCTAAAGGGTATAGCGCTAGGAAACCCTCTTCTGGATTTCGACACTGATATGAATGCAGTTGATGAGTATTACTGGTCTCATGGAATTATATCTGATTATGCATACAAAATCAGTACCTCTCTATGTAACTCGTCTAGAGCATTAAGAGAATACTTCAGTGGCCATCTTTCCAACGATTGTCTTTTTGCAGTTCAAAAAGTCTCAGAAGAATATTCTTATACAACTTCCATTGATCCATATTATGTTGTTGGGAACAAATGTCTTTCTTACAATGTTTCTCAGGCAGGTTTCCTTAGGGAGATTCTAAATTCAGGGTTGTTTCAGTTTAGGAACTCCCACAATGTTCTTCAAACCGAAGATCCTTACCAGCAAGTTGATGAGTGTATTTTGAAATATTCAGAGATGTACTTGAACAGGAAAGATGTGCAGAAAGCTCTCCATGCTCGGTTGGTGGGAACCGCCAATTATCATTTGTGCAGCAATGGGGATCAAGATTCTGTGATTCCATTCATGGGCACGAGGAGATTGGTTGATAGACTAGCAAAGACACTTGGACTTAAAACAACCGTGCCTTACAGTGCCTGGTTTGTGGACAAGCAGGTTGGAGGATGGACACAGGTTTATGGCAATCACCTCACCTACGCCACAGTAAGAGGAGCTTCACATGCCACTCCAGTTATTCAACCAAAGAGATCTTTTGTTTTGTTTAATGCGTTTCTTCAAGGGAAACCACTCCCTAAACCATGA 1434 0.4052 MFPQPWILLFLIAITTSLLFMFSLVKSFPEADKVKSLPGQSSPVSFQQFAGYVAVDDMNQRALFYYFVEAQINPASKPLLLWLNGGPGCTSVGVGAFTEHGPFVTNQGEAIEKNQYSWNKGAANFKSLIILSLCHNKLKLRSVLSFAEANILYLDSPAGVGFSYSLNLSFYKTLNDEVTARDSLVFLQRWFAKFPEYKNRDFYIMGESYGGHYVPQLAELIIKSKVNFNLKGIALGNPLLDFDTDMNAVDEYYWSHGIISDYAYKISTSLCNSSRALREYFSGHLSNDCLFAVQKVSEEYSYTTSIDPYYVVGNKCLSYNVSQAGFLREILNSGLFQFRNSHNVLQTEDPYQQVDECILKYSEMYLNRKDVQKALHARLVGTANYHLCSNGDQDSVIPFMGTRRLVDRLAKTLGLKTTVPYSAWFVDKQVGGWTQVYGNHLTYATVRGASHATPVIQPKRSFVLFNAFLQGKPLPKP 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1232 477 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 390 475 IPR001563 GO:0004185|GO:0006508
Aed7g1232 477 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 147 389 IPR001563 GO:0004185|GO:0006508
Aed7g1232 477 Gene3D - 389 474 - -
Aed7g1232 477 PRINTS Carboxypeptidase C serine protease (S10) family signature 114 126 IPR001563 GO:0004185|GO:0006508
Aed7g1232 477 PRINTS Carboxypeptidase C serine protease (S10) family signature 441 454 IPR001563 GO:0004185|GO:0006508
Aed7g1232 477 PRINTS Carboxypeptidase C serine protease (S10) family signature 190 215 IPR001563 GO:0004185|GO:0006508
Aed7g1232 477 Pfam Serine carboxypeptidase 148 390 IPR001563 GO:0004185|GO:0006508
Aed7g1232 477 Pfam Serine carboxypeptidase 38 122 IPR001563 GO:0004185|GO:0006508
Aed7g1232 477 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 9 122 IPR001563 GO:0004185|GO:0006508
Aed7g1232 477 ProSitePatterns Serine carboxypeptidases, serine active site. 204 211 IPR018202 GO:0004185
Aed7g1232 477 PANTHER CARBOXYPEPTIDASE 9 122 - -
Aed7g1232 477 Gene3D alpha/beta hydrolase 29 318 IPR029058 -
Aed7g1232 477 Gene3D - 357 388 - -
Aed7g1232 477 PANTHER CARBOXYPEPTIDASE 390 475 - -
Aed7g1232 477 PANTHER CARBOXYPEPTIDASE 147 389 - -
Aed7g1232 477 SUPERFAMILY alpha/beta-Hydrolases 30 475 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1232 Aed-Chr7 9957435 9962205 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1232 387 474 Calmodulin-binding Proteins AT2G22960 31.818 2.87e-12 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1232 K16297 - gmx:100819443 769.615