Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1224 ATGGCGTCAAGAGCAATTGTTCAACAACAACAACAACAACAACAAGCCAGAGGTGAAGCAGTAGTAGGGGGAGGAAAACTGCAGAAGAAGAATGGTGTAGCGGATGGAAGGAACCGCAAGGCATTAGGTGATATTGGAAATTTGGCCAATGTAAGAGGCGTTGTTGAAGTCAAACCAAATCGCCCCATCACAAGGAGCTTTGGTGCTCAACTACTTGCAAATGCACAAGCAGCAGCGGCTGCTGAGAATAACAAGGTTGTGACTTTTTTGGAATTGCAGAAACAGGCTTGTCCTAATGTGGCTGGTCCTCCTCCTGTTGCTAATGGAGGAATTGCAGTGGCCAAAAGAGCAGCCCCGAAACCGGTCCAGAAGAAAGTGACCGTAAAACCTAAGCCTGAGGAAGTCATTGACATTGAAGCTAGTCCAGACAAGGAGGTCCACAAGGGCAAGAAGAAGGAAGGAGATGCCAACTCCAAGAAGAAATCACACACTCTTACTTCAGTTCTCACTGCTAGGAGCAAGGCAGCATGTGGCATAACAAAAAAACCAAAGGAGCAGATTGTTGACATTGATGCTAGTGATGTTGATAATGAGCTTGCTGCTGTGGAGTACATTGATGACATTTACAAGTTCTACAAACTTGTTGAGAACGAGAGCCGCCCCCATGACTACATAGACTCACAACCTGAGATAAATGAGAGGATGCGAGCTATTCTGGTAGATTGGCTGGTAGATGTACACGCCAAGTTTGAACTTTCACTTGAGACCCTTTACTTGACAGTCAACATAATTGATCGGTTCCTAGCGGTTAAGATGGTTGCAAGGAGGGAACTTCAATTGGTTGGCATCAGTGCCATGCTCATGGCATCCAAATATGAAGAAATCTGGCCCCCTGAGGTTAATGACTTTGTCTGCCTCTCAGACAGGGCTTACACTCATGAAATGATACTGGCTATGGAGAAAACCATATTGGGCAAGCTGGAATGGACTTTGACTGTTCCTACACCTTTTGTTTTCCTTGTTCGTTTTATCAAGGCATCGGTCCCAGATCAGATGCTGGAAAGCATGGCTCATTTTCTCTCTGAATTGGGAATGATGAACTATGCAACCTTGATGTATTGCCCATCAATGCTTGCTGCCTCAGCAGTCTTTGCTGCTAGATGCACTCTGAACAAGGCTCCTCTTTGGAATGAGACCCTTAAGCTGCACACCGGTTACTCACAAGAGCAACTCATGGATTGTGCTAGACTATTGGTGGGGTTCCACTCCACAATTGGGAATGGAAAGCTTAAGGTTGTGTGCAGAAAATATTCTGACCCTCAGAAGGGTGCTGTTGCTGGGCTTCCACCAGCTAAATTTCTTCTGCCTGAAGGTTCTGCTTCTTCTGCCTCCCAATCCCTATAG 1404 0.4594 MASRAIVQQQQQQQQARGEAVVGGGKLQKKNGVADGRNRKALGDIGNLANVRGVVEVKPNRPITRSFGAQLLANAQAAAAAENNKVVTFLELQKQACPNVAGPPPVANGGIAVAKRAAPKPVQKKVTVKPKPEEVIDIEASPDKEVHKGKKKEGDANSKKKSHTLTSVLTARSKAACGITKKPKEQIVDIDASDVDNELAAVEYIDDIYKFYKLVENESRPHDYIDSQPEINERMRAILVDWLVDVHAKFELSLETLYLTVNIIDRFLAVKMVARRELQLVGISAMLMASKYEEIWPPEVNDFVCLSDRAYTHEMILAMEKTILGKLEWTLTVPTPFVFLVRFIKASVPDQMLESMAHFLSELGMMNYATLMYCPSMLAASAVFAARCTLNKAPLWNETLKLHTGYSQEQLMDCARLLVGFHSTIGNGKLKVVCRKYSDPQKGAVAGLPPAKFLLPEGSASSASQSL 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1224 467 MobiDBLite consensus disorder prediction 1 40 - -
Aed7g1224 467 Gene3D - 207 446 - -
Aed7g1224 467 SMART cyclin_7 338 420 IPR013763 -
Aed7g1224 467 SMART cyclin_7 241 325 IPR013763 -
Aed7g1224 467 CDD CYCLIN 235 324 IPR013763 -
Aed7g1224 467 Gene3D - 221 332 - -
Aed7g1224 467 CDD CYCLIN 332 419 IPR013763 -
Aed7g1224 467 Pfam Cyclin, N-terminal domain 207 331 IPR006671 -
Aed7g1224 467 MobiDBLite consensus disorder prediction 140 164 - -
Aed7g1224 467 MobiDBLite consensus disorder prediction 1 18 - -
Aed7g1224 467 ProSitePatterns Cyclins signature. 236 267 IPR006671 -
Aed7g1224 467 SUPERFAMILY Cyclin-like 333 452 IPR036915 -
Aed7g1224 467 SMART Cyclin_C_2 334 451 IPR004367 -
Aed7g1224 467 PANTHER G2/MITOTIC-SPECIFIC CYCLIN S13-6 26 458 - -
Aed7g1224 467 SUPERFAMILY Cyclin-like 196 331 IPR036915 -
Aed7g1224 467 PIRSF Cyclin_A_B_D_E 1 464 IPR039361 -
Aed7g1224 467 MobiDBLite consensus disorder prediction 140 160 - -
Aed7g1224 467 PANTHER CYCLINS 26 458 IPR039361 -
Aed7g1224 467 Pfam Cyclin, C-terminal domain 334 449 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1224 Aed-Chr7 9824374 9827330 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1224 1 455 Core Cell Cycle Gene Families AT4G37490 52.442 1.71e-144 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1224 K21777 - gmx:547919 753.051