Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1223 ATGCCTTCGAGTTCGAATTCAAAGCAGAAAAAGAAGCAATCCAAGGTTTTGCAGCAGCAGCACTCATCACTGTCCTCCAATGCCGCCACGCCTTCCAAAACGCACCAACTTTCCGATTCCGAACTCGCCTCCTTATGCGAGGAAGCTTCTCGAAAGTTCCCTTCTCTCATCGCTAAATCCGCGTTCGCCGCCGAACTCACCCACGTCGACGACACCGTTTCCGTCTCTAACAGAATCTGGCTCTCCGCACCTTCCATGCTCTCCCTCTCTCTCCCCCCCGGTTCCCCTGTCTCGGTGTCTGTTCCGTCTTCGGGGGAGGATAGTTCGCGATTGCATAGCTTTCCCCTTACTTCGTTAGCTAATGAATGTGACGAATTCCATGGATTAGAAAGTATCAAGGCGTTTGATCATTACGCGGGAAACTACTTTGTGCTTGCAACAGTTTTGAAGAATGGAGTACGCCTGTCTTCAAACCTTTATTATGCCATAGGATGTCCTCCTTTGGGAACAAGTGTGTTTGTTCATCCAATACAGAAAAATCTCGCAACTGGGAGCAACGGACAATATTCTACAGAAAATAATTGTCTACCTATATATAATTGCAAGGAATTGTATCTTCAGTTGGTTCCTTCTAAGAATGGGCTACCGTTGAAATTTAATAACTTTCCATCATTGGATGTGTCTAAGGTGAAATCCCATGTCCAATCTGAGAATGATGTTGTTGCATCTCCTGCAACGCCTTCTTATGGATCAAAGTTTTCTAATGCCAGTGGGCTGTCTTCTCCACTATTTGATGATTCAGTGTCTAGTGTGCCAAATCAGAATAGTCAATCATTGAATTCATTTGATGTTAGCTTAGCATTAGGGGATGAAAGTTCTAGAGAATTACTACTGAAGGGTGCAAAACCATGGTTATATTCTCGGTATTTACTTCTAGGGAATCTTGTCAGTGTCCCAATGTTATCAGAGCTGTGCTTTTTCCAAGTGATAGGAGCTAAGAAGCATCCAGTTACCAAATCTGATCATTATCCATCAAATGAAAACAGTGATTTATATCCTGAGGATTCTGATATAGTAGATAGTGTACATCAGGCTTTCATTGCTAATGATGAAACAAAGGTATTTTTTTCTCTTCCATCCGATGCAGCATCTGAAGAGCCAATTCAAAGGGATATACCTTGTGTGAAACTAGAACACAAAGTAGCTAATGCTAGCTTACATGATAAAATCTCTAAATTGGGTGGTCTATCAAAAGAATATACACTTCTAAAGGACATAATTTCTTCGTCAGTGAACGATACTTTATCAAGTTTTGGTTTAAGAACTACAAGAGGTGTCCTTCTTCATGGTCCACCTGGTACAGGAAAGACATCCCTGGCTCAATTATGTGCTCATGATGTTGGAGTCAAATTTTTCCCATTAAATGGACCTGAAATTGTTACCCAATATTATGGGGAAAGTGAACAAAAATTGCATGAAGTTTTTGATTCAGCCATTCAAGCTGCACCTGCTGTGGTATTCATTGATGAATTAGATGCAATTGCCCCTGCAAGGAAAGATGGAGGTGAAGAGCTATCTCAAAGATTGGTTGCAACTTTATTGAATCTGATGGATGGTATTAGTAGAACTGAAGGGTTAATAGTAATTGCTGCCACTAACCGGCCTGACCATATTGAGCCAGCTCTCAGACGACCGGGAAGATTTGACAAGGAAATTGAAATTGGTGTTCCATCACCCAACCAACGTTCGGATATTTTGTTCAGTCTTCTCAGTGAAATGGATCACTCTCTCTCTGAGTTGCAAGTTGAACATCTTGCCACCATCACTCATGGTTTTGTAGGTGCTGATCTAGCTGCACTCTGCAATGAGGCAGCCTTGATTTGTCTACGACGTTATGCTAATTTTAAGAAGACTTATGATTCTTGTTCTGATTATATAACAAAGCAACCTGTTCTAATGAATGGTGCAACAGACTCAATAGATCATTCAGGTGATGCAACTTCATCTGTTTCAGATATGTCAGTGGCCTCCAGTCGTGTATTACCTTCCTACATGATAGGAATGACTTCTGAAACAATGGAAATAATTCCTGATAATGGTGAAGAAGAGCAGGCATTGAAAGTAAGCTTTGAAGATTTTCAGAAGGCTAGGATGAAAATAAGACCTAGTGCCATGAGAGAGGTAATCCTTGAGGTTCCAAAGGTTAATTGGGAAGATGTTGGCGGTCAAAAGGAGGTCAAAGCTCAATTGATGGAAGCAGTTGAATGGCCACAAAAACACCATGATGCATTCAATCGTATTGGGACTCGCCCTCCTACAGGTGTACTGCTGTTTGGGCCTCCAGGTTGTAGTAAAACCCTCATGGCACGTGCAGTTGCTTCTGAAGCAGGGCTGAACTTTCTAGCAGTCAAGGGTCCTGAACTCTTCAGCAAATGGGTTGGTGAATCTGAGAAGGCTGTCAGATCATTATTTGCAAAAGCAAGGGCTAATGCCCCATCAATAGTATTTTTTGATGAAATAGATAGTCTTGCTGTAACTCGTGGGAAGGAAAGTGATGGTGTTTCAGTGTCAGATAGGGTCATGAGTCAACTTCTTGTTGAGATGGATGGTCTGCATCAAAGAGTTAATGTCACTGTCATAGCTGCTACAAATAGGCCAGACAAAATTGACCCTGCACTTTTAAGGCCAGGACGCTTTGACCGTTTGCTATATGTTGGACTTCCAAATGAGGTGGACAGGGAAGAGATATATCGCATTCATCTGCGTAAAATCCCGTGTGGTTCTGATGTTACCCTTATAGAACTAGCTCAACTCACAGATGGTTGTACTGGGGCTGACATATCATTGATATGTCGGGAGGCTGCTGTTGCAGCAATTGAGGAGAGCCTTGAGGCTTCAGTTATAACAATGGAGCATTTAAAGACAGCAATCAAACAGATCCAGCCATCGGAAGTTCACTCCTACCAAAAGCTGTCAGCAAAATTTCAAAGGGCTGTCCACAACTGTGATATAAAGGATGAATTCAATCATATGCAGTGTGACAGCATATCTACTCAGTTCAACATTTGGAAGTTCCTAAAATCTTGCACATCGTTCCTCTATCAGATTCCATTTGTCATCTTTAATTTGAGAACTGCTCAAAGTAGTTAA 3150 0.4187 MPSSSNSKQKKKQSKVLQQQHSSLSSNAATPSKTHQLSDSELASLCEEASRKFPSLIAKSAFAAELTHVDDTVSVSNRIWLSAPSMLSLSLPPGSPVSVSVPSSGEDSSRLHSFPLTSLANECDEFHGLESIKAFDHYAGNYFVLATVLKNGVRLSSNLYYAIGCPPLGTSVFVHPIQKNLATGSNGQYSTENNCLPIYNCKELYLQLVPSKNGLPLKFNNFPSLDVSKVKSHVQSENDVVASPATPSYGSKFSNASGLSSPLFDDSVSSVPNQNSQSLNSFDVSLALGDESSRELLLKGAKPWLYSRYLLLGNLVSVPMLSELCFFQVIGAKKHPVTKSDHYPSNENSDLYPEDSDIVDSVHQAFIANDETKVFFSLPSDAASEEPIQRDIPCVKLEHKVANASLHDKISKLGGLSKEYTLLKDIISSSVNDTLSSFGLRTTRGVLLHGPPGTGKTSLAQLCAHDVGVKFFPLNGPEIVTQYYGESEQKLHEVFDSAIQAAPAVVFIDELDAIAPARKDGGEELSQRLVATLLNLMDGISRTEGLIVIAATNRPDHIEPALRRPGRFDKEIEIGVPSPNQRSDILFSLLSEMDHSLSELQVEHLATITHGFVGADLAALCNEAALICLRRYANFKKTYDSCSDYITKQPVLMNGATDSIDHSGDATSSVSDMSVASSRVLPSYMIGMTSETMEIIPDNGEEEQALKVSFEDFQKARMKIRPSAMREVILEVPKVNWEDVGGQKEVKAQLMEAVEWPQKHHDAFNRIGTRPPTGVLLFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIVFFDEIDSLAVTRGKESDGVSVSDRVMSQLLVEMDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGLPNEVDREEIYRIHLRKIPCGSDVTLIELAQLTDGCTGADISLICREAAVAAIEESLEASVITMEHLKTAIKQIQPSEVHSYQKLSAKFQRAVHNCDIKDEFNHMQCDSISTQFNIWKFLKSCTSFLYQIPFVIFNLRTAQSS 1049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1223 1049 Gene3D - 736 983 IPR027417 -
Aed7g1223 1049 Gene3D - 396 577 IPR027417 -
Aed7g1223 1049 CDD AAA 741 907 - -
Aed7g1223 1049 Gene3D - 578 735 - -
Aed7g1223 1049 Pfam AAA+ lid domain 601 632 IPR041569 -
Aed7g1223 1049 Pfam AAA+ lid domain 929 974 IPR041569 -
Aed7g1223 1049 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 410 634 IPR027417 -
Aed7g1223 1049 Gene3D - 908 978 - -
Aed7g1223 1049 ProSitePatterns AAA-protein family signature. 877 895 IPR003960 GO:0005524|GO:0016887
Aed7g1223 1049 CDD AAA 440 575 - -
Aed7g1223 1049 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 733 984 IPR027417 -
Aed7g1223 1049 SMART AAA_5 771 909 IPR003593 -
Aed7g1223 1049 SMART AAA_5 442 578 IPR003593 -
Aed7g1223 1049 PANTHER AAA-FAMILY ATPASE 43 1005 - -
Aed7g1223 1049 Pfam ATPase family associated with various cellular activities (AAA) 775 906 IPR003959 GO:0005524|GO:0016887
Aed7g1223 1049 Pfam ATPase family associated with various cellular activities (AAA) 446 575 IPR003959 GO:0005524|GO:0016887
Aed7g1223 1049 MobiDBLite consensus disorder prediction 1 39 - -
Aed7g1223 1049 PANTHER - 43 1005 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1223 Aed-Chr7 9814121 9822884 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1223 10 1035 Calmodulin-binding Proteins AT3G56690 54.623 0.0 987
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1223 - - gmx:100788600 1752.26