Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1222 ATGAGGGAAGAGGATTCGAATTGGTTTTCGCGATGGGAAGAGGAACTCCCACCGCCAGACGAACTCATGCCTCTGTCGCAAACCCTAATTTCTCCCGATCTAGCCATGTTCTTCGAAATCCGAAACCCACACACCACCACCAACCCCAACAGCGCTTCGCAACATCACCACCACCACCACCAACAACAACAACAACAACATCAACCACTGCAGCAACAACAGCAACAACAGCCTTCGAACCCTTCCTCGCTCCCCAACCCGCAACAACAACAACAGCAACAGCCGACCTCCGCCGAATTCGCTGACTCCGGCGAGCTCGGCTCCGGCACCGCCGGCGAGGAGCCGGCCAGAACCCTGAAGCGGCCACGCCTCGTGTGGACCCCACAGCTCCACAAGCGCTTCGTCGACGCCGTGGCGCACCTCGGCATCAAAAACGCCGTTCCCAAGACCATAATGCAGCTCATGAGCGTCGACGGTTTGACCCGCGAAAACGTCGCCAGTCACTTGCAGAAGTACCGTCTCTACCTCAAGCGCATGCAGGGGATTTCATCCGCCGGCCCCGGAGGTCCCGGCGGTGGCGCCTCCGGCGCCGGCGCCGACCCCGCCACGGAACACTTGTTCGCTAGCTCGCCGGTGCCGGCGCATTTCTTGCACCCCGCGGCGAGGCCGAACTCGGATCACTTCTTGCCGTTCGTGCCGGTGCCGGCGCTCCACCACCACCAGCAGCAACAGCAGCAACTGGCGGCAGCGGCGCAGTACCACCGGCAGGTGGGGCATTTCGGGTCGCCGCCGAACGGGCACTTCGAGAACCCGTTCATGTCTAGGCCGAATCTTCAGAGGATGGGTGGTGGTGGTGGTGGTCCTGTGCACAACAACCACCACCCTGTGAGTGGTTATGTGGAGGACATGGAGTCTGCTAATGCTGCCTCTGGAGGTAGAAAGGTTCTTACTCTGTTTCCAACTGGAGATGATTAA 975 0.6041 MREEDSNWFSRWEEELPPPDELMPLSQTLISPDLAMFFEIRNPHTTTNPNSASQHHHHHHQQQQQQHQPLQQQQQQQPSNPSSLPNPQQQQQQQPTSAEFADSGELGSGTAGEEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISSAGPGGPGGGASGAGADPATEHLFASSPVPAHFLHPAARPNSDHFLPFVPVPALHHHQQQQQQLAAAAQYHRQVGHFGSPPNGHFENPFMSRPNLQRMGGGGGGPVHNNHHPVSGYVEDMESANAASGGRKVLTLFPTGDD 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1222 324 MobiDBLite consensus disorder prediction 186 205 - -
Aed7g1222 324 Pfam Myb-like DNA-binding domain 125 173 IPR001005 -
Aed7g1222 324 MobiDBLite consensus disorder prediction 64 103 - -
Aed7g1222 324 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 126 177 IPR017930 -
Aed7g1222 324 PANTHER HOMEODOMAIN-LIKE PROTEIN-RELATED 1 324 - -
Aed7g1222 324 MobiDBLite consensus disorder prediction 1 18 - -
Aed7g1222 324 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 122 174 IPR006447 GO:0003677
Aed7g1222 324 MobiDBLite consensus disorder prediction 1 120 - -
Aed7g1222 324 MobiDBLite consensus disorder prediction 257 294 - -
Aed7g1222 324 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 324 IPR044841 GO:0003700|GO:0006355
Aed7g1222 324 Gene3D - 118 180 - -
Aed7g1222 324 SUPERFAMILY Homeodomain-like 118 178 IPR009057 -
Aed7g1222 324 SUPERFAMILY beta-sandwich domain of Sec23/24 49 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1222 Aed-Chr7 9811697 9812671 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1222 1 324 G2-like Transcription Factor Family AT3G10760 55.923 2.66e-97 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aed7g1222 Myb_DNA-binding 2.5e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1222 - - gmx:100815363 469.159