LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed7g1212	ATGGAGTTCTTATCCTTCCTTTCCCTTTTCATTTCCCTTCTCTTCCTCCTCTATCTCTGCGTTGTTCAATTCCTCGCTGGAGATAAACCCCGCACCAACAAAGGCTTCAAAGACTACCCTCTCATCGGGACCCTACCGGAATTCATCAAAAACCGCCACCGATTCCTGGAATGGAGCACCCAGGTCCTCCGCGACTGCCCCACCAACACCGCTGTCCTCTCCCGCCCCTACAAGCTCCGCGGTGTCATCACGGCCAACCCCGACAACGTGGAGCACGTGCTCAAAACCAGATTCGACAACTATCCTAAGGGAGAACGCTTCATCCTCCTCCTCCAAGACTTTCTCGGTAACGGAATCTTCAACTCCGACGCCGACCTCTGGAAAGTGCAGCGCAAAACCGCCAGCTACGAGTTCAGCACCAAATCGCTCCGAAACTTCGTCGTCAACGTCGTCACCTTCAAACTCCAAACGAGGCTTCTTCCGATTCTCTCCAAAGCCAATGAGTCAAACAGTGTTCTCGATTTGCAGGACTTGTTAGAGCGCTTCGCCTTCGACAACGTCTGCAAGCTAGTCTTCAATGTGGACCCCGCCTGCCTCGGCGGCGGCGACACCGCCAGCACCGACTTCATGCGCGCCTTCGAGGACGCCGCGTTTTTCAGCTCAGAAAGGTTCTTGAGCGTGCTTCCTTTTGTGTGGAAAACAAAGAAGCTCTTCAATATTGGATCAGAACGCAGGCTAAGAAAATCAATCTCTACCGTCCACCAGTTCGTAGATTTGATCATACGGTCCAGATTGGAATCCAGGGACAGTAGCGGAGACGAGGATTTACTATCGCGTTTCATCAAAACAGATGATAGCTCCCCAGAGTTTCTCCGCGACGTAGTCATATGCTTCATTTTCGCGGGTCGTGATTCGACGTCGTCCGCGCTGAGCTGGTTCTTCTGGATTCTGTCCTCCAGACCCGACGTGCAGAGAAAAATTCTTAACGAAATCAAAATGGCTCGGTCATCCTCCACGCGCGGTTGCGGCGCGTTTGAGTACGAGGAGCTGAAAGAGATGCATTACCTGCACGCGGCGATTTCGGAGACGATGAGGTTGTACCCACCAGTTCCCGTTGACACGAAGAGGTGTCTGGACGACGACGTATTGCCAGACGGAACGCATGTCGGGAAAGGGTGGTTCGTAACGTACCACACGTACGCGATGGGGAGGATGGAGAGCGTGTGGGGAAAAGACTGTACCGAATATAAGCCCGAAAGGTGGTTGGAGAACGGTGCGTACCTACCGGAGAGTCCGTTTCGGTATCCGGTGTTTCACGCGGGTCCACGAATGTGTATGGGGAAGGAGATGGCTTACATTCAGATGAAGTCGATTGCAGCTTTGGTGATGGAGAGGTTTGAGATTGAGGCAGTGGATAAGGACACGTGTCCGGAACATGTATTGTCTTTAACATTAAGGATCAAAGGAGGGTTGCCAGTGAGGGTAAGATTAAGGAATGAATGCTAG	1506	0.5232	MEFLSFLSLFISLLFLLYLCVVQFLAGDKPRTNKGFKDYPLIGTLPEFIKNRHRFLEWSTQVLRDCPTNTAVLSRPYKLRGVITANPDNVEHVLKTRFDNYPKGERFILLLQDFLGNGIFNSDADLWKVQRKTASYEFSTKSLRNFVVNVVTFKLQTRLLPILSKANESNSVLDLQDLLERFAFDNVCKLVFNVDPACLGGGDTASTDFMRAFEDAAFFSSERFLSVLPFVWKTKKLFNIGSERRLRKSISTVHQFVDLIIRSRLESRDSSGDEDLLSRFIKTDDSSPEFLRDVVICFIFAGRDSTSSALSWFFWILSSRPDVQRKILNEIKMARSSSTRGCGAFEYEELKEMHYLHAAISETMRLYPPVPVDTKRCLDDDVLPDGTHVGKGWFVTYHTYAMGRMESVWGKDCTEYKPERWLENGAYLPESPFRYPVFHAGPRMCMGKEMAYIQMKSIAALVMERFEIEAVDKDTCPEHVLSLTLRIKGGLPVRVRLRNEC	501

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed7g1212	501	SUPERFAMILY	Cytochrome P450	37	498	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Aed7g1212	501	Gene3D	Cytochrome P450	22	501	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Aed7g1212	501	PRINTS	E-class P450 group I signature	290	307	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Aed7g1212	501	PRINTS	E-class P450 group I signature	445	468	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Aed7g1212	501	PRINTS	E-class P450 group I signature	357	375	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Aed7g1212	501	PRINTS	E-class P450 group I signature	310	336	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Aed7g1212	501	PRINTS	E-class P450 group I signature	435	445	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Aed7g1212	501	PRINTS	P450 superfamily signature	436	445	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Aed7g1212	501	PRINTS	P450 superfamily signature	301	318	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Aed7g1212	501	PRINTS	P450 superfamily signature	445	456	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed7g1212	Aed-Chr7	9722582	9724087	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aed7g1212	35	499	Cytochrome P450	AT3G56630	59.362	0.0	593

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed7g1212	-		-	gmx:100812147	814.683

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