Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1208 ATGGCAGTCTCTCTGGAAAATGAACTGAAAACTGAAGAAGACTCAGAATTCCCTCTGAAAGAAATTGGAAATGAAGGTCTCATAAAACGGATTCTCAGAAAAGGAGTCACTTGGCAAACTCCATTCTCTGGAGATGAAGTGGAAGAGGACAAGTTGAAAACGGAGCATCTCTTGAATCCAGTTATGATAGAGGGTCCCCGTGAAGTTATCAAAGGCTGGGATGAAGGAGTTGCCACCATGAAGAAAGGGGAGAGAGCAATCTTCAAAATACCACCAAACTTGGCATATGGGGAAGCAGGGTCTCCTCCATTGATTCCTCCCAATGCAACGCTAATTTTTTACATTGAAATGCTGACTTGGAGTGCCATAAGGGATTTGACTGGCGATGGAGGAATCAACAAAAAGATAATACTGGAGGGAGAAGGCTGGGCTACTCCCAGAGAAGCTGATGAGGTGCTAGGCTATCTATGTCCTGCTATGAGCATAGCAGTGAAGACAATGAGAAAGGGCGAGGTGGCAGAACTAGCTTTGAGATTCTTCTATGGACTCACTCAAAATTCAAATAGAATCACTGAGCTAGATGGTATTCTTCCACCAGATACTAATTTAAGTAGCATCAAGCTTGAGCTGGTATCATGGAAAATTGTTAGTGATGTCACGGGAGATAAGAAGATACTGAAAAAGGTTAAGAAAGTGGGTGAGGGGTTTGATCGTCCTAACGAGGGATCCCAAGTGAAAGTGATATATTTGTGCAAAGGGGAAGACGGTACGATTATTGAGAGGAAAGGATCAGAGGAAGAACCTTTTGAGTTCACAACTCAAGAAGAACAGGTACCTGAGGGTCTAGAAAGAGCGATAATGACAATGAAGAAAGGAGAACAAGCTCTGGTGACTGTGGATGCTGAATATTTGTGCAACTATGATAATTCACAGGGAAACACAGCCAATATTAAAGTCCTTTATTATGAAGTTGAGTTGGTTGATTTCGTTAAGGAAAAACCATTTTGGAAAATGGACACACGAGAGAAAATAGAAGCTTGTGAGAGGAAGAAGCATGATGGAAATCTTCTGTTCAAGGCTGAAAATTTCAGCCATGCGTCCAAGAAATACGAAAAGGCTGTAAAATACATTGAGTTTGATCATTCATTCAGTGAAGATGAGAAGCGTCGCGCTAATACCTTACGTTTATCCTGTAATTTGAACAATGCTGCCTGTAAACTTAAACTGGAGGAAAGATGCCAAGCATTCTTGAAAACATCAGACTTGGAGAAAGCTGAGGTTGACATTAAAAGAGCTTTGACTATTGATCCAAAGAACAGAGACATTAAACTTGAGTACAAAGAGCTGAAACATAAGCAAAAGGAATACAGTAGATATGAAGCTGATATCTTCGGCACAATGCTTTCAAGGATGAACTAG 1419 0.4094 MAVSLENELKTEEDSEFPLKEIGNEGLIKRILRKGVTWQTPFSGDEVEEDKLKTEHLLNPVMIEGPREVIKGWDEGVATMKKGERAIFKIPPNLAYGEAGSPPLIPPNATLIFYIEMLTWSAIRDLTGDGGINKKIILEGEGWATPREADEVLGYLCPAMSIAVKTMRKGEVAELALRFFYGLTQNSNRITELDGILPPDTNLSSIKLELVSWKIVSDVTGDKKILKKVKKVGEGFDRPNEGSQVKVIYLCKGEDGTIIERKGSEEEPFEFTTQEEQVPEGLERAIMTMKKGEQALVTVDAEYLCNYDNSQGNTANIKVLYYEVELVDFVKEKPFWKMDTREKIEACERKKHDGNLLFKAENFSHASKKYEKAVKYIEFDHSFSEDEKRRANTLRLSCNLNNAACKLKLEERCQAFLKTSDLEKAEVDIKRALTIDPKNRDIKLEYKELKHKQKEYSRYEADIFGTMLSRMN 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1208 472 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 155 216 - -
Aed7g1208 472 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 411 472 - -
Aed7g1208 472 PANTHER PEPTIDYLPROLYL ISOMERASE 322 411 - -
Aed7g1208 472 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 242 330 IPR001179 GO:0003755
Aed7g1208 472 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 65 118 IPR001179 GO:0003755
Aed7g1208 472 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 238 327 IPR001179 GO:0003755
Aed7g1208 472 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 322 411 - -
Aed7g1208 472 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 216 314 - -
Aed7g1208 472 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 4 153 - -
Aed7g1208 472 SUPERFAMILY TPR-like 340 467 IPR011990 GO:0005515
Aed7g1208 472 Gene3D Tetratricopeptide repeat domain 412 465 IPR011990 GO:0005515
Aed7g1208 472 Gene3D Tetratricopeptide repeat domain 333 411 IPR011990 GO:0005515
Aed7g1208 472 PANTHER PEPTIDYLPROLYL ISOMERASE 216 314 - -
Aed7g1208 472 PANTHER PEPTIDYLPROLYL ISOMERASE 4 153 - -
Aed7g1208 472 Gene3D - 23 125 IPR046357 GO:0003755
Aed7g1208 472 Gene3D - 215 332 IPR046357 GO:0003755
Aed7g1208 472 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 26 121 IPR001179 GO:0003755
Aed7g1208 472 PANTHER PEPTIDYLPROLYL ISOMERASE 155 216 - -
Aed7g1208 472 PANTHER PEPTIDYLPROLYL ISOMERASE 411 472 - -
Aed7g1208 472 SUPERFAMILY FKBP-like 22 120 - -
Aed7g1208 472 SUPERFAMILY FKBP-like 211 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1208 Aed-Chr7 9667832 9671591 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1208 21 471 Calmodulin-binding Proteins AT5G48570 45.962 1.16e-149 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1208 - - gmx:100785412 773.852