Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1187 ATGGAACACCATTTTGGTCAAGACACTACACCTGTATCTGGGTCTTTTGATAAGACTAGGGTTTTAAATGTGAAGCCTTTGAGAACTCTTGTTCCTGTGTTCCCTTCACCATCTAATCCTGCTTCGTCTTCAACTCCACAAGGTGGTGCCCCTTTTGTGTGTGTTTCTCCTTCTGGTCCTTTTCCTTCAGGGGTTGCACCCTTCTATCCTTTCTTTATCTCCCCGGAATCCCAGAGGCTCTCTGAACAGAATGCGCAAACCCCGACCAGTCAACGTGCGGCTCCGATATCTACTGCAGTTCCAATTAATTCATTTAGGACACCAACTGGGGCTGCAAATGGAGATGTGGGCTCGTCGCGAAAGAATGCTCGAAATCGTGGACAGGTCCCAGAGGAAGATGGCTATGGTAATGCTGAGATAGAGGAAATTGATGAAGGAACTGGGACTGGGAGGTCAAAGCGCAAGTCACATAAGAAGGCAAAGGGACGGCATAGTGGTGGATCTGGTTCTGCTGATGTTGATCCGGATGCAGTTGTTGCTGATATTCTCAAATCACTCAACACAATGGTTTTCGATGTACTTAATCAACCAGAAGGTAGTAGGGACTCAGTTTCATATACACTCATGATATATGAAGTGATGCGAAGAAAGCTTGGGCAAATTGAAGATTCAAATAGGGCAGCTAACTCCGGAGCAAAGCGGCCTGATTTGAAGGCAGGTGCACTTATGATGAATAAAGGGATTCGGACCAACAGCAAGAAGCGTATTGGAGCTGTGCCTGGTGTTGAGATTGGAGATATTTTCTTTTTCAGATTTGAATTGTGCTTAGTGGGCTTACATGCTCCTTCTATGGCTGGAATTGATTACATTGGTACCAAAACCAGTCAAGAAGAAGAACCCTTAGCTGTAAGTATCGTCTCATCTGGAGGGTATGAAGATAATGTGGAGGATGGGGATGTGCTGATTTACAGTGGCCAAGGTGGGGTTAATCGTGACAAGGGAGCAAGTGATCAAAAGCTTGAAAGGGGTAATCTTGCATTGGAGAAGAGTGCACATAGAGGTAATGAAGTGAGAGTAATTAGGGGTTTGAGGGATCCACAACATCCAACTGGGAAGGTTTACGTCTATGATGGCCTTTACAAGATTCAAAATTCCTGGGTGGAGAAAGCAAAATCTGGTTTCAATGTATTCAAGTATAAATTAGTCAGGTTGCCTGGACAGCCTCAAGCATATATGGTTTGGAAATCCGTTCAACAATGGACTGAGAAATCTGCTTCAAGAGCTGGGGTTATACTGCCTGATCTTACTTCTGGGGCTGAAAATGTACCTGTTTGTCTTGTGAATGATGTTGATAACGAGAAGGGACCTGCATATTTCACTTACATCCCAACTCTCAAGAATTTGAGGCCAACTGCTCCTGTGGAATCTTCTACTGGATGTCCTTGTGTTGGGGGATGTCAACCTAGCAATTTTAATTGTCCTTGCATTCAAAAGAATGGAGGCTATCTACCATATTCTTCGGCTTCGTTACTTGCGGACCTAAAATCTGTGATATATGAGTGTGGTCCTTCTTGTCAATGCCCTCCTAATTGCCGAAATCGTGTTTCTCAAGGTGGCTTGAAATTTCGTTTGGAGGTTTTCAGAACCAAGAATAAAGGTTGGGGTCTTAGATCATGGGATGCTATTCGTGCAGGAACTTTCATTTGTGAGTATGCAGGGGAAGTCGTAGATAGTGCTAGAGTGGAAGAGCTTGGTGGTGACAATGAAGATGATTACATTTTTGATTCTACTCACATTTATCAGCAACTGGAAGTTTTTTCTGGTGATACTGAAGCTCCAAAAATCCCATCCCCTCTTTATATATCAGCAAAAAATGAAGGGAATGTTGCTCGCTCTAGCAAAAGCCAGACAGTAGCAGCAGGGTGA 1926 0.4393 MEHHFGQDTTPVSGSFDKTRVLNVKPLRTLVPVFPSPSNPASSSTPQGGAPFVCVSPSGPFPSGVAPFYPFFISPESQRLSEQNAQTPTSQRAAPISTAVPINSFRTPTGAANGDVGSSRKNARNRGQVPEEDGYGNAEIEEIDEGTGTGRSKRKSHKKAKGRHSGGSGSADVDPDAVVADILKSLNTMVFDVLNQPEGSRDSVSYTLMIYEVMRRKLGQIEDSNRAANSGAKRPDLKAGALMMNKGIRTNSKKRIGAVPGVEIGDIFFFRFELCLVGLHAPSMAGIDYIGTKTSQEEEPLAVSIVSSGGYEDNVEDGDVLIYSGQGGVNRDKGASDQKLERGNLALEKSAHRGNEVRVIRGLRDPQHPTGKVYVYDGLYKIQNSWVEKAKSGFNVFKYKLVRLPGQPQAYMVWKSVQQWTEKSASRAGVILPDLTSGAENVPVCLVNDVDNEKGPAYFTYIPTLKNLRPTAPVESSTGCPCVGGCQPSNFNCPCIQKNGGYLPYSSASLLADLKSVIYECGPSCQCPPNCRNRVSQGGLKFRLEVFRTKNKGWGLRSWDAIRAGTFICEYAGEVVDSARVEELGGDNEDDYIFDSTHIYQQLEVFSGDTEAPKIPSPLYISAKNEGNVARSSKSQTVAAG 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1187 641 MobiDBLite consensus disorder prediction 79 124 - -
Aed7g1187 641 Pfam Pre-SET motif 436 534 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Aed7g1187 641 Gene3D - 255 412 IPR036987 -
Aed7g1187 641 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 119 631 IPR025794 GO:0016571
Aed7g1187 641 Pfam SAD/SRA domain 256 407 IPR003105 -
Aed7g1187 641 SUPERFAMILY PUA domain-like 239 422 IPR015947 -
Aed7g1187 641 SMART preset_2 432 526 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Aed7g1187 641 ProSiteProfiles YDG domain profile. 257 403 IPR003105 -
Aed7g1187 641 MobiDBLite consensus disorder prediction 79 174 - -
Aed7g1187 641 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 12 631 - -
Aed7g1187 641 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 12 631 - -
Aed7g1187 641 SMART G9a_1 252 407 IPR003105 -
Aed7g1187 641 ProSiteProfiles SET domain profile. 542 641 IPR001214 GO:0005515
Aed7g1187 641 SUPERFAMILY SET domain 418 631 IPR046341 -
Aed7g1187 641 Gene3D SET domain 413 635 IPR046341 -
Aed7g1187 641 ProSiteProfiles Pre-SET domain profile. 478 539 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1187 Aed-Chr7 9436348 9439648 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1187 6 631 Su(var)3-9 homologs AT1G73100 46.573 2.18e-179 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1187 K24405 - gmx:100786650 1174.84