LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed7g1187	ATGGAACACCATTTTGGTCAAGACACTACACCTGTATCTGGGTCTTTTGATAAGACTAGGGTTTTAAATGTGAAGCCTTTGAGAACTCTTGTTCCTGTGTTCCCTTCACCATCTAATCCTGCTTCGTCTTCAACTCCACAAGGTGGTGCCCCTTTTGTGTGTGTTTCTCCTTCTGGTCCTTTTCCTTCAGGGGTTGCACCCTTCTATCCTTTCTTTATCTCCCCGGAATCCCAGAGGCTCTCTGAACAGAATGCGCAAACCCCGACCAGTCAACGTGCGGCTCCGATATCTACTGCAGTTCCAATTAATTCATTTAGGACACCAACTGGGGCTGCAAATGGAGATGTGGGCTCGTCGCGAAAGAATGCTCGAAATCGTGGACAGGTCCCAGAGGAAGATGGCTATGGTAATGCTGAGATAGAGGAAATTGATGAAGGAACTGGGACTGGGAGGTCAAAGCGCAAGTCACATAAGAAGGCAAAGGGACGGCATAGTGGTGGATCTGGTTCTGCTGATGTTGATCCGGATGCAGTTGTTGCTGATATTCTCAAATCACTCAACACAATGGTTTTCGATGTACTTAATCAACCAGAAGGTAGTAGGGACTCAGTTTCATATACACTCATGATATATGAAGTGATGCGAAGAAAGCTTGGGCAAATTGAAGATTCAAATAGGGCAGCTAACTCCGGAGCAAAGCGGCCTGATTTGAAGGCAGGTGCACTTATGATGAATAAAGGGATTCGGACCAACAGCAAGAAGCGTATTGGAGCTGTGCCTGGTGTTGAGATTGGAGATATTTTCTTTTTCAGATTTGAATTGTGCTTAGTGGGCTTACATGCTCCTTCTATGGCTGGAATTGATTACATTGGTACCAAAACCAGTCAAGAAGAAGAACCCTTAGCTGTAAGTATCGTCTCATCTGGAGGGTATGAAGATAATGTGGAGGATGGGGATGTGCTGATTTACAGTGGCCAAGGTGGGGTTAATCGTGACAAGGGAGCAAGTGATCAAAAGCTTGAAAGGGGTAATCTTGCATTGGAGAAGAGTGCACATAGAGGTAATGAAGTGAGAGTAATTAGGGGTTTGAGGGATCCACAACATCCAACTGGGAAGGTTTACGTCTATGATGGCCTTTACAAGATTCAAAATTCCTGGGTGGAGAAAGCAAAATCTGGTTTCAATGTATTCAAGTATAAATTAGTCAGGTTGCCTGGACAGCCTCAAGCATATATGGTTTGGAAATCCGTTCAACAATGGACTGAGAAATCTGCTTCAAGAGCTGGGGTTATACTGCCTGATCTTACTTCTGGGGCTGAAAATGTACCTGTTTGTCTTGTGAATGATGTTGATAACGAGAAGGGACCTGCATATTTCACTTACATCCCAACTCTCAAGAATTTGAGGCCAACTGCTCCTGTGGAATCTTCTACTGGATGTCCTTGTGTTGGGGGATGTCAACCTAGCAATTTTAATTGTCCTTGCATTCAAAAGAATGGAGGCTATCTACCATATTCTTCGGCTTCGTTACTTGCGGACCTAAAATCTGTGATATATGAGTGTGGTCCTTCTTGTCAATGCCCTCCTAATTGCCGAAATCGTGTTTCTCAAGGTGGCTTGAAATTTCGTTTGGAGGTTTTCAGAACCAAGAATAAAGGTTGGGGTCTTAGATCATGGGATGCTATTCGTGCAGGAACTTTCATTTGTGAGTATGCAGGGGAAGTCGTAGATAGTGCTAGAGTGGAAGAGCTTGGTGGTGACAATGAAGATGATTACATTTTTGATTCTACTCACATTTATCAGCAACTGGAAGTTTTTTCTGGTGATACTGAAGCTCCAAAAATCCCATCCCCTCTTTATATATCAGCAAAAAATGAAGGGAATGTTGCTCGCTCTAGCAAAAGCCAGACAGTAGCAGCAGGGTGA	1926	0.4393	MEHHFGQDTTPVSGSFDKTRVLNVKPLRTLVPVFPSPSNPASSSTPQGGAPFVCVSPSGPFPSGVAPFYPFFISPESQRLSEQNAQTPTSQRAAPISTAVPINSFRTPTGAANGDVGSSRKNARNRGQVPEEDGYGNAEIEEIDEGTGTGRSKRKSHKKAKGRHSGGSGSADVDPDAVVADILKSLNTMVFDVLNQPEGSRDSVSYTLMIYEVMRRKLGQIEDSNRAANSGAKRPDLKAGALMMNKGIRTNSKKRIGAVPGVEIGDIFFFRFELCLVGLHAPSMAGIDYIGTKTSQEEEPLAVSIVSSGGYEDNVEDGDVLIYSGQGGVNRDKGASDQKLERGNLALEKSAHRGNEVRVIRGLRDPQHPTGKVYVYDGLYKIQNSWVEKAKSGFNVFKYKLVRLPGQPQAYMVWKSVQQWTEKSASRAGVILPDLTSGAENVPVCLVNDVDNEKGPAYFTYIPTLKNLRPTAPVESSTGCPCVGGCQPSNFNCPCIQKNGGYLPYSSASLLADLKSVIYECGPSCQCPPNCRNRVSQGGLKFRLEVFRTKNKGWGLRSWDAIRAGTFICEYAGEVVDSARVEELGGDNEDDYIFDSTHIYQQLEVFSGDTEAPKIPSPLYISAKNEGNVARSSKSQTVAAG	641

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed7g1187	641	MobiDBLite	consensus disorder prediction	79	124	-	-
	Aed7g1187	641	Pfam	Pre-SET motif	436	534	IPR007728	GO:0005634\|GO:0008270\|GO:0018024\|GO:0034968
	Aed7g1187	641	Gene3D	-	255	412	IPR036987	-
	Aed7g1187	641	ProSiteProfiles	Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile.	119	631	IPR025794	GO:0016571
	Aed7g1187	641	Pfam	SAD/SRA domain	256	407	IPR003105	-
	Aed7g1187	641	SUPERFAMILY	PUA domain-like	239	422	IPR015947	-
	Aed7g1187	641	SMART	preset_2	432	526	IPR007728	GO:0005634\|GO:0008270\|GO:0018024\|GO:0034968
	Aed7g1187	641	ProSiteProfiles	YDG domain profile.	257	403	IPR003105	-
	Aed7g1187	641	MobiDBLite	consensus disorder prediction	79	174	-	-
	Aed7g1187	641	PANTHER	HISTONE-LYSINE N-METHYLTRANSFERASE	12	631	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed7g1187	Aed-Chr7	9436348	9439648	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aed7g1187	6	631	Su(var)3-9 homologs	AT1G73100	46.573	2.18e-179	523

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed7g1187	K24405		-	gmx:100786650	1174.84

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