Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1170 ATGGCCGAGCCACAGGGTCGTACTGATGGTAATGGTGATGGTGGTGCGTCTGGAAGCAGACGCAGAAGCACTGCTTCCAAACGTGCCTTGACAACACAAACACAAGATGAAGCAATGGCGGCGGGTGGATCTTTGCCCGCGACGCCATGTGGGGCTTGCAAGTTCTTGAGAAGAAAGTGCATTGGAGGATGCATTTTTGCACCCTACTTTGGTAGTGACCAGGGTGCGGCCAAGTTTGCAGCTGTGCACAAAGTGTTTGGGGCTAGCAATGTGTCAAAGCTCTTGTCCAACATTCCGGTGAATCGCCGCCACGAAGCGGCAACAACCATATCGTATGAGGCTCAAGCAAGGCTATCTGATCCGGTCTATGGTTGTGTCTCCACCATCCTTGCTCTACAACAACAGGTGGCATCTTTACAAGCAGAGTTAGCAATGTTGCAAACTCAGTTGATGAACAGCAAGTTTGTCTATGCAAGTGCTTTTCAAACTACACAACTACAACAACCAAACATGAATGTAGCAGCACTACAACCAGCATATTCCAACAATTCATGTGCTTCCACCAATCTTATCATGAACTTGAGAAACTTCAATGACCATACACCTAGCTTTGACCTTGCAATGGACACAACACCCTCATCACATAGTGTGGAGCCTCTTGGACTCACAAGGTTGTCCCAATATGAGGATGAAGATGAAGAAGAAAGCAAGACTCAACTAGTCTTCAACCACCGTTAA 738 0.4743 MAEPQGRTDGNGDGGASGSRRRSTASKRALTTQTQDEAMAAGGSLPATPCGACKFLRRKCIGGCIFAPYFGSDQGAAKFAAVHKVFGASNVSKLLSNIPVNRRHEAATTISYEAQARLSDPVYGCVSTILALQQQVASLQAELAMLQTQLMNSKFVYASAFQTTQLQQPNMNVAALQPAYSNNSCASTNLIMNLRNFNDHTPSFDLAMDTTPSSHSVEPLGLTRLSQYEDEDEEESKTQLVFNHR 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1170 245 ProSiteProfiles LOB domain profile. 48 150 IPR004883 -
Aed7g1170 245 MobiDBLite consensus disorder prediction 1 41 - -
Aed7g1170 245 Pfam Lateral organ boundaries (LOB) domain 49 147 IPR004883 -
Aed7g1170 245 PANTHER LOB DOMAIN-CONTAINING PROTEIN 20 18 236 - -
Aed7g1170 245 PANTHER LOB DOMAIN CONTAINING PROTEIN 18 236 - -
Aed7g1170 245 MobiDBLite consensus disorder prediction 17 39 - -
Aed7g1170 245 Coils Coil 129 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1170 Aed-Chr7 9300418 9303420 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1170 17 236 AS2 family AT3G03760 57.983 3.55e-76 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aed7g1170 LOB 5.7e-38 No_clan