Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1139 ATGGGTGTATCCCAAAAATGGTTCAGAAATATTGTTCGGGGCAGATTCTTCATCAGATCATCCAACAAAGACATCATCGTTCTCCCTCGACCAAGTATTTGCACCAATGAATGCGAAGAAGAAGAAGAAGCCATACTCATAAGGAATGAAGATAACTTCAGTTTCCCAACACCAATAATTTCTTCAATCACCAAGGAAGATGCTGCTGCAATTAAGATCCAAGCTTGCTTCAGGGGCCATCTAGCCAGAAGAGCATATAAGGCTTTGAAGAGCCTAGTGAAGCTGCAAGCATTGGTTCGTGGGATGTGGGTTAGGAAACAATCACGTATAGCAATGCAGTGTATGCACGCACTTGTGCGATTACAAGTCAGGGTTCGTGCAAGGCAACTACTTGGTAGCTTTGATAAGGAACGATCGAGTACCTAA 426 0.4343 MGVSQKWFRNIVRGRFFIRSSNKDIIVLPRPSICTNECEEEEEAILIRNEDNFSFPTPIISSITKEDAAAIKIQACFRGHLARRAYKALKSLVKLQALVRGMWVRKQSRIAMQCMHALVRLQVRVRARQLLGSFDKERSST 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1139 141 PANTHER IQ-DOMAIN 5-RELATED 6 132 - -
Aed7g1139 141 ProSiteProfiles IQ motif profile. 66 94 IPR000048 GO:0005515
Aed7g1139 141 PANTHER OS04G0561100 PROTEIN 6 132 - -
Aed7g1139 141 SMART iq_5 88 109 IPR000048 GO:0005515
Aed7g1139 141 SMART iq_5 65 87 IPR000048 GO:0005515
Aed7g1139 141 ProSiteProfiles IQ motif profile. 90 117 IPR000048 GO:0005515
Aed7g1139 141 Pfam IQ calmodulin-binding motif 90 107 IPR000048 GO:0005515
Aed7g1139 141 Pfam IQ calmodulin-binding motif 68 87 IPR000048 GO:0005515
Aed7g1139 141 Gene3D - 64 117 - -
Aed7g1139 141 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 110 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1139 Aed-Chr7 9020067 9021256 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1139 45 132 IQD Protein Family AT3G51380 62.500 1.46e-32 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1139 - - gmx:100788207 202.986