Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1138 ATGAGTTCTTATGATTTCACTTTGCCATCGTCGCTTTTGCCAACCGAGGCATCACCCGAATGGAACAACAAAGCTGACAACGCGTGGCAACTAACCGCGGCAACCTTAGTGGGCCTGCAGAGTGTCCCCGGGCTCGTGATCCTCTACGGCAGCATGGTGAAGCGCAAATGGGCCGTGAACTCGGCCTTCATGGCCCTATACGCCTTCGCGTGCGTGCTCATCTGTTGGGTCACGTGGGCCCATGGCATGGCCTTCGGGGCTGGGCTTCTGCCCTTCGTGGGAAAGCCCAACCACGCCCTGACCGAGAGTTTCCTCCTTGCAAAGTCAACGATTGGGTATTTTCCAATGGCTGACTTTGTGTTCTACCAGTTTGCTTTTGCCGCAATTACCCTTGTGTTGCTTGCGGGGTCTTTGCTTGGGAGAATGAACTTCTATGCGTGGATGATGTTTGTGCCTTTGTGGCTTACTTTGTCTTACACCGTTGGTGCCTTTAGCATTTGGGACGCTGAAGGGTTCCTTCAAGGGAAGATAATTGACTATGCTGGTGGCTTTGTCATTCATTTGTCTTCTGGCGTTGCTGGCTTCACAGCTGCTTATTGGGTTGGTCCAAGAATTTCACAGGACAGGCAAAACTTTCCACCAAATAATATAATTCACATGCTTGGAGGTGCAGGGTTTTTGTGGATGGGTTGGACAGGTTTCAATGGTGGAGCTCCATTCCAAGTGGGAGAAATCGCATCCTTGGCCATTTACAACACCCATCTATGCACTGCCACAAGCCTACTCGTTTGGCTTGCACTGGACATGATTGTATATACCAAGAGCTCAGTCATTGGTGCTGTTCAGGGAATGATCACTGGCCTCGTCTGTATCACACCAGGAGCAGGCTTGGTGGAATCATGGGCAGCAATATTGATGGGAGCAATGTCCGGTTCCATTCCATGGTACACAATGATGGTGCTACACAAAAAATCCGCATTCTTCCAAAGCGTAGACGACACACTGGGAGTCTTCCACACCCACGCCGTGGCGGGTCTTCTCGGCGGCCTTCTCTCCGGCGTGTTCGCCAAGCCGGAGCTTCTAAAAACAATGTACCACGGCACAAGCTACTGCCCCGGCTTGTTCTACAGCTTCTTCTCCAACAATGAGGGTGAATTAGAAGTGCGTCGTGGCTTCATGCAAATTTCGTACCAGTTGCTTGGAGCCAGTTTTGTTATTGTTTGGAACGTTGTTGTCACTAGCATCATTTGTTTTTTTATAAGCCGCGTTGTGGATCTTAGGATGCAAGAGGAGGATCTTGAGGTTGGTGATGATGCTGCTCATGGTGAAGAGGCTTATGCTCTTTGGGGTGATGGTGAGAGAATGAGGGTTCCTCTTCGTCTTCGTATTAGTACTCCCACGATTCCTTCTTTCTGTCGACGAATTAGGTTTTCAATTCCACTTACTAGTAAAGAAGGACAAGAACAAGAATAG 1473 0.4956 MSSYDFTLPSSLLPTEASPEWNNKADNAWQLTAATLVGLQSVPGLVILYGSMVKRKWAVNSAFMALYAFACVLICWVTWAHGMAFGAGLLPFVGKPNHALTESFLLAKSTIGYFPMADFVFYQFAFAAITLVLLAGSLLGRMNFYAWMMFVPLWLTLSYTVGAFSIWDAEGFLQGKIIDYAGGFVIHLSSGVAGFTAAYWVGPRISQDRQNFPPNNIIHMLGGAGFLWMGWTGFNGGAPFQVGEIASLAIYNTHLCTATSLLVWLALDMIVYTKSSVIGAVQGMITGLVCITPGAGLVESWAAILMGAMSGSIPWYTMMVLHKKSAFFQSVDDTLGVFHTHAVAGLLGGLLSGVFAKPELLKTMYHGTSYCPGLFYSFFSNNEGELEVRRGFMQISYQLLGASFVIVWNVVVTSIICFFISRVVDLRMQEEDLEVGDDAAHGEEAYALWGDGERMRVPLRLRISTPTIPSFCRRIRFSIPLTSKEGQEQE 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1138 490 PANTHER AMMONIUM TRANSPORTER 6 475 - -
Aed7g1138 490 TIGRFAM amt: ammonium transporter 26 446 IPR001905 GO:0008519|GO:0016020|GO:0072488
Aed7g1138 490 Pfam Ammonium Transporter Family 28 446 IPR024041 GO:0008519|GO:0016020|GO:0072488
Aed7g1138 490 PANTHER AMMONIUM TRANSPORTER MEP2 6 475 IPR001905 GO:0008519|GO:0016020|GO:0072488
Aed7g1138 490 Gene3D Ammonium transporter AmtB like domains 11 449 IPR029020 -
Aed7g1138 490 ProSitePatterns Ammonium transporters signature. 179 204 IPR018047 GO:0008519|GO:0016020|GO:0072488
Aed7g1138 490 PRINTS Rhesus blood group protein signature 123 139 IPR002229 GO:0005887
Aed7g1138 490 PRINTS Rhesus blood group protein signature 218 236 IPR002229 GO:0005887
Aed7g1138 490 PRINTS Rhesus blood group protein signature 249 271 IPR002229 GO:0005887
Aed7g1138 490 PRINTS Rhesus blood group protein signature 342 358 IPR002229 GO:0005887
Aed7g1138 490 SUPERFAMILY Ammonium transporter 21 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1138 Aed-Chr7 9011024 9013338 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1138 116 476 Inorganic Solute Cotransporters AT2G38290 56.164 2.50e-136 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1138 K03320 - gmx:100815876 872.078
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1624 10 21061166 21065650 Aed7g1138 7 9011024 9013338 PCT