Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed7g1136 | ATGGCTGATTCTCCCCTCGCAAGGAATTCAAGGTCCCCTTCCCCGTGGAAAGCTCAGTCAAGGTCAAGGTCAAGGTCTAGGTCTAGGTCGAGGTCTAGGCCTAGACAGAGGCCAAGATCCCGTTCTAGAAGTCGTGGCAGGTCAAGGTCACCAATTCATGGAAGGGTCACCGAAAGAGACCTAGAGGAGCATTTCTCCAAGGAAGGAAAGGTTGCTTCATGTTTTCTCGTGGTGGAGCCCCGTACACGAATTTCTCGTGGTTTTGCTTTTGTTACAATGGAAACTTCTGAAGGTGCAGAGGGCTGTATCAAGTACCTCAATCAATCAGTTTTAGAGGGTCGTTACATCACTGTTGAGCGGGTAATGGATTTTTCCACGGAATCACGAAGAAAACGCGCTAGAACTCCAACACCAGGGCACTATCTTGGACTGAAAAACACTAGGGAGTATGGTCATCGTGGTGACCGGGGAAGGTATCGTGACGGTCCTGACCGCGACAATTATTCACACCGTAGGTCTCCAAGGCGTTCACCATACAGAGGTGGCCAAGATTATTCACCCCGGCGCTCACCCCATGGGGGAGGAAGGTCTAGGAGGGATAGGTCTAGGTCACTTCCTTATTCTCCACATGGTAGCCCAGACAGGAAGTATGCTCGTGGATCTAGGTGA | 669 | 0.5082 | MADSPLARNSRSPSPWKAQSRSRSRSRSRSRSRPRQRPRSRSRSRGRSRSPIHGRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMETSEGAEGCIKYLNQSVLEGRYITVERVMDFSTESRRKRARTPTPGHYLGLKNTREYGHRGDRGRYRDGPDRDNYSHRRSPRRSPYRGGQDYSPRRSPHGGGRSRRDRSRSLPYSPHGSPDRKYARGSR | 222 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed7g1136 | 222 | MobiDBLite | consensus disorder prediction | 146 | 173 | - | - | |
Aed7g1136 | 222 | PANTHER | TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED | 55 | 218 | - | - | |
Aed7g1136 | 222 | PANTHER | TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED | 2 | 55 | - | - | |
Aed7g1136 | 222 | MobiDBLite | consensus disorder prediction | 191 | 205 | - | - | |
Aed7g1136 | 222 | PANTHER | RNA RECOGNITION MOTIF | 2 | 55 | - | - | |
Aed7g1136 | 222 | MobiDBLite | consensus disorder prediction | 1 | 63 | - | - | |
Aed7g1136 | 222 | MobiDBLite | consensus disorder prediction | 22 | 50 | - | - | |
Aed7g1136 | 222 | SUPERFAMILY | RNA-binding domain, RBD | 21 | 120 | IPR035979 | GO:0003676 | |
Aed7g1136 | 222 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Aed7g1136 | 222 | Gene3D | - | 4 | 135 | IPR012677 | - | |
Aed7g1136 | 222 | PANTHER | RNA RECOGNITION MOTIF | 55 | 218 | - | - | |
Aed7g1136 | 222 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 56 | 116 | IPR000504 | GO:0003723 | |
Aed7g1136 | 222 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 51 | 123 | IPR000504 | GO:0003723 | |
Aed7g1136 | 222 | MobiDBLite | consensus disorder prediction | 125 | 222 | - | - | |
Aed7g1136 | 222 | SMART | rrm1_1 | 50 | 119 | IPR000504 | GO:0003723 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed7g1136 | Aed-Chr7 | 9002395 | 9005411 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed7g1136 | 56 | 118 | Eukaryotic Initiation Factors Gene Family | AT1G49760 | 34.921 | 4.43e-06 | 45.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed7g1136 | K12897 | - | gmx:100499944 | 283.108 |