Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1136 ATGGCTGATTCTCCCCTCGCAAGGAATTCAAGGTCCCCTTCCCCGTGGAAAGCTCAGTCAAGGTCAAGGTCAAGGTCTAGGTCTAGGTCGAGGTCTAGGCCTAGACAGAGGCCAAGATCCCGTTCTAGAAGTCGTGGCAGGTCAAGGTCACCAATTCATGGAAGGGTCACCGAAAGAGACCTAGAGGAGCATTTCTCCAAGGAAGGAAAGGTTGCTTCATGTTTTCTCGTGGTGGAGCCCCGTACACGAATTTCTCGTGGTTTTGCTTTTGTTACAATGGAAACTTCTGAAGGTGCAGAGGGCTGTATCAAGTACCTCAATCAATCAGTTTTAGAGGGTCGTTACATCACTGTTGAGCGGGTAATGGATTTTTCCACGGAATCACGAAGAAAACGCGCTAGAACTCCAACACCAGGGCACTATCTTGGACTGAAAAACACTAGGGAGTATGGTCATCGTGGTGACCGGGGAAGGTATCGTGACGGTCCTGACCGCGACAATTATTCACACCGTAGGTCTCCAAGGCGTTCACCATACAGAGGTGGCCAAGATTATTCACCCCGGCGCTCACCCCATGGGGGAGGAAGGTCTAGGAGGGATAGGTCTAGGTCACTTCCTTATTCTCCACATGGTAGCCCAGACAGGAAGTATGCTCGTGGATCTAGGTGA 669 0.5082 MADSPLARNSRSPSPWKAQSRSRSRSRSRSRSRPRQRPRSRSRSRGRSRSPIHGRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMETSEGAEGCIKYLNQSVLEGRYITVERVMDFSTESRRKRARTPTPGHYLGLKNTREYGHRGDRGRYRDGPDRDNYSHRRSPRRSPYRGGQDYSPRRSPHGGGRSRRDRSRSLPYSPHGSPDRKYARGSR 222
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1136 222 MobiDBLite consensus disorder prediction 146 173 - -
Aed7g1136 222 PANTHER TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED 55 218 - -
Aed7g1136 222 PANTHER TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED 2 55 - -
Aed7g1136 222 MobiDBLite consensus disorder prediction 191 205 - -
Aed7g1136 222 PANTHER RNA RECOGNITION MOTIF 2 55 - -
Aed7g1136 222 MobiDBLite consensus disorder prediction 1 63 - -
Aed7g1136 222 MobiDBLite consensus disorder prediction 22 50 - -
Aed7g1136 222 SUPERFAMILY RNA-binding domain, RBD 21 120 IPR035979 GO:0003676
Aed7g1136 222 MobiDBLite consensus disorder prediction 1 21 - -
Aed7g1136 222 Gene3D - 4 135 IPR012677 -
Aed7g1136 222 PANTHER RNA RECOGNITION MOTIF 55 218 - -
Aed7g1136 222 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 56 116 IPR000504 GO:0003723
Aed7g1136 222 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 51 123 IPR000504 GO:0003723
Aed7g1136 222 MobiDBLite consensus disorder prediction 125 222 - -
Aed7g1136 222 SMART rrm1_1 50 119 IPR000504 GO:0003723
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Aed7g1136 Aed-Chr7 9002395 9005411 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1136 56 118 Eukaryotic Initiation Factors Gene Family AT1G49760 34.921 4.43e-06 45.1
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1136 K12897 - gmx:100499944 283.108