Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1132 ATGGAGTTTTTGCCAAATCAATGCTCTTTGATGGGTTCCTTTGGGAATTTCATTGAGAGGGTCAAAAGGGTTGGTACCCTCTTCGTCTCTGCCACCATTGGGAACATCTTCTCTGCAATCTTCACCTTCTGCTTTGCATTAGTTGGCACTTTGTTGGGGGCTATGACTGGAGCCTTGATAGGGCAAGAGACAGAGAGTGGTTTCATTCGAGGGGCTGCTATAGGAGCCATATCAGGAGCTGTTTTTTCCATTGAAGTGTTTGAATCTTCTCTTGTTCTTTGGAAATCTGACGAATCTGGAATTGGGTGTCTCTTATACTTGATTGATGTTCTTGCTAGCCTATTGAGTGGGAGATTAGTGCGTGAAAGAATAGGTCCAGCCATGTTGAGTGCTGTCCAAAGTCAGATGGGTGCCATTGAAATAAGCTTTGATGAGGTTCAAAACCTCTTTGACATCGGCGGCTCCAAGGGTCTATCGAGAGATTCAGTTGAAAAGATCCCAAAGATTCCAATTACTAGTGACAACAATGTTGATGCTTCTGGGGAGAGAGTTTCATGTTCAGTTTGCCTCCAGGACTTTCTGCTTGGGGAGATTGGGAGAAGTTTGCCTTATTGTCATCATATGTTTCACCTACCTTGCATTGATAAGTGGCTGATCAAGCATGGTTCTTGCCCATTATGCAGAAGGGATCTGTAA 696 0.4411 MEFLPNQCSLMGSFGNFIERVKRVGTLFVSATIGNIFSAIFTFCFALVGTLLGAMTGALIGQETESGFIRGAAIGAISGAVFSIEVFESSLVLWKSDESGIGCLLYLIDVLASLLSGRLVRERIGPAMLSAVQSQMGAIEISFDEVQNLFDIGGSKGLSRDSVEKIPKIPITSDNNVDASGERVSCSVCLQDFLLGEIGRSLPYCHHMFHLPCIDKWLIKHGSCPLCRRDL 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1132 231 CDD RING-H2_PA-TM-RING 186 228 - -
Aed7g1132 231 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 149 231 IPR013083 -
Aed7g1132 231 Pfam YMGG-like Gly-zipper 45 81 IPR027367 -
Aed7g1132 231 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 13 231 IPR044523 -
Aed7g1132 231 ProSiteProfiles Zinc finger RING-type profile. 186 228 IPR001841 -
Aed7g1132 231 SUPERFAMILY RING/U-box 171 231 - -
Aed7g1132 231 Pfam Ring finger domain 185 228 IPR001841 -
Aed7g1132 231 PANTHER RING/U-BOX SUPERFAMILY PROTEIN-RELATED 13 231 - -
Aed7g1132 231 SMART ring_2 186 227 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1132 Aed-Chr7 8979771 8981607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1132 18 231 C3H Transcription Factor Family AT5G66070 73.832 3.35e-111 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1132 - - gmx:100816939 422.935