Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1122 ATGCTATCAAGGTTGATGGACTTTCTGACTGCCTGCTGGCGGCGAAGATCCTCCGACGGAAAGGGTTCCGAGGTTTCTGGGCGGAAGGAAGGGCTGCTGTGGTACAAGGATGCCGGGCAGCACTTGTTTGGTGAATACTCAATGGCTGTTGTCCAGGCCAACAACCTGCTCGAGGACCAGAGCCAGATTGAGTCTGGTCCTCTCAGCTTGCTTGACACTGGCCCTTATGGCACCTTTGTTGGTGTTTACGATGGACATGGCGGACCTGAGACCTCGCGCTATGTCTGTGATCATCTCTTCCAACATCTAAAAAGATTTGCAACTGAGCAGAAGTCCATGTCTGTGGAGGTTATTCGGAAGGCATACCAAGCCACAGAAGAAGGTTTTTTGTCGGTGGTTACCAAACAGTGGCCTCTGAATCCCCAAATTGCTGCTGTGGGAACTTGTTGTTTGGCTGGTGTGATTTGTGGTGGTATCCTCTATATTGCCAATCTTGGTGATTCCCGTGCTGTGCTTGGCCGGGTTGTCAGAGCAACTGGGGAGGTTTTGGCGATCCAGCTTTCGTCAGAGCATAATGTGGGCATAGAATCTGTGAGACAAGAGATGCATTCTTTGCATCCGGATGACTCAAAAATTGTGGTTCTAAAGCACAATGTATGGCGGGTGAAGGGTCTGATACAGATTTCAAGATCCATTGGCGATGTATACCTAAAAAAGGCTGAATTCAACAAGGAACCATTGTATGCTAAGTTTCGTATCCGGGATGGTTTTAAGAGGCCCATTTTGAGCTCTGACCCATCAATTTCTGTTCATGAACTTCAAGAGCATGATCAATTTCTCATATTTGCTTCTGACGGTCTTTGGGAACACCTTAGCAATCAGGATGCTGTTGATATAGTTCAAAACAACCCACACAATGGAATTGCTCGGAGGCTCATCAAAGTCGCTTTACAGGAAGCAGCAAAGAAGAGAGAGATGAGGTACTCTGATTTGAAGAAAATTGATCGCGGTGTCCGCCGGCATTTCCACGATGACATCACAGTTGTAGTTGTATTTCTTGACTCCAATCTCGTCAGCAGAGCCAGCTCGGTAAGAGGTCCTCCTTTGTCGGTGAGAGGAGGTGGCGTTCCCCTACCTTCTAGATCCTTGGCTCCCTGTGCTGCACCTATGGAAACTTAG 1179 0.4809 MLSRLMDFLTACWRRRSSDGKGSEVSGRKEGLLWYKDAGQHLFGEYSMAVVQANNLLEDQSQIESGPLSLLDTGPYGTFVGVYDGHGGPETSRYVCDHLFQHLKRFATEQKSMSVEVIRKAYQATEEGFLSVVTKQWPLNPQIAAVGTCCLAGVICGGILYIANLGDSRAVLGRVVRATGEVLAIQLSSEHNVGIESVRQEMHSLHPDDSKIVVLKHNVWRVKGLIQISRSIGDVYLKKAEFNKEPLYAKFRIRDGFKRPILSSDPSISVHELQEHDQFLIFASDGLWEHLSNQDAVDIVQNNPHNGIARRLIKVALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVVVVFLDSNLVSRASSVRGPPLSVRGGGVPLPSRSLAPCAAPMET 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1122 392 Pfam Protein phosphatase 2C 78 322 IPR001932 -
Aed7g1122 392 SMART PP2C_4 37 351 IPR001932 -
Aed7g1122 392 Gene3D - 31 363 IPR036457 -
Aed7g1122 392 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 5 384 - -
Aed7g1122 392 PANTHER ALPHABET, ISOFORM E-RELATED 5 384 - -
Aed7g1122 392 SUPERFAMILY PP2C-like 54 354 IPR036457 -
Aed7g1122 392 CDD PP2Cc 43 353 IPR001932 -
Aed7g1122 392 ProSitePatterns PPM-type phosphatase domain signature. 79 87 IPR000222 GO:0043169
Aed7g1122 392 ProSiteProfiles PPM-type phosphatase domain profile. 42 353 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1122 Aed-Chr7 8845888 8852288 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1122 1 381 PP2C-type Phosphatase Gene Family AT3G51370 78.478 0.0 628