Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1098 ATGCCAATTACTGGCAGAAGAATTTTCCACAGGGATGTGGAAAAGGAAGAGTTTCAGTATGCCAGCACTCAATGCCTCTCATCCTACTACAGTGTCTTTGTGGTTCGTCTAGCAATCATGGCCATGCTAGCCATCTTGATTGGTCTTCTCACTTTCCTGACATGGCATTTCACAAAGATTTACACAACAAAATCTCTTAATAGCTTGGCTTATGACCTGCGTTATGAACTTCTGCAACGCCCCATCTTGAGGATGTGGAACATTTTGAATTCCACTGCGGAAATTACAACTGCTCAGATGTATGACGCGATGAGAGCTGTGACGTGGGCACTGTTTGCTAGTAAAAAGGCTCTCAATTCAATAACTGTCAAATACAAGAATGGATTTGTCCAAGCATTCCATAGAGACCTGAAGGATAACAACACCTTTTACATTTATTCTGATCTTGCAAATCACTCCACGGTTGCCGGTGGCTACAATGAGATGAATCCACGTTTGTCGCGTGAAGCTTGGAATGATAAAGGCATTCATGGTATTCACAAGCCTGCAATTTGGTATCGCGAGCCACTTGATCCCGTCAGCGGTGAGAAGATTGGAAAAGTAATGCCAATTGCACCAGAAGACTCAATCAACATAGCTGGCCTCTCCCAAGTGCCTGATGGTGTAGCTTCATGGCATGTTGCTGTTAGCAAGTTCACAGATTCACCACTGCTTTCTGCAGCATTGCCAGTTTGGGACTCTTCTAACAAAAGCATTGTGGCAGTTGTGGGGGTCACAACTGCACTTTACAGTGTGGGGCAGCTCATGAAAGAGCTAGTTGAGATGCATAGTGGTCACATGTATTTGACCTCCCAAGAGGGTTACTTGCTTGCAACTTCCACAAATGCACCTCTGCTGTCAAATTCTACCAAGCCTCCTAAGCTTAAGATGGCTGTTGAATGTGAAAATGAAGTCATAAGAGAGGGAGCTCAGTGGCTACAGAAAACCTATGGCAACAATTTCCCTCAAAGTCATGAGCTTCATGTAGAGAATGTGAGGCTAGGCCGCCAACAATACTACATCGACTCGTTCTTCCTGAACTTGAAGAGACTTCCTCTGGTGGGTGTAATAATCATACCGAGAAAGCATATCATGGGGCAGGCAGATGAAAGAGCCTTCAAAACATTGGTTATTCTGATATCTGCATCATTGTGTATTATTGTCATTGGATGTGTTTGCATTTTGATACTGACCAATGGAGTGTCAAAGGAAATGAAACTAAGAGCAGAACTGATCAGTCACTTGGAAGCAAGAAGGAAGGCAGAGGCATCAAGCAACTACAAAAGTCAATTTCTTGCAAATATGAGTCATGAATTGAGGACACCAATGGCAGCAGTAATCGGGTTACTAGACATTCTTATATCCGATGACCATCTCACAAATGAGCAATGTGCAACAGTTACTCAAATAAGAAAATGCTCAACTGCATTGCTTCGTCTACTTAATAACATCTTGGATCTAAGCAAGGTGGAATCTGGAAAACTGGTCCTAGAAGATGCAGAATTTGACTTGGGACGGGAACTTGAAGGGCTTGTAGATATGTTTTCTGTGCAGTGCATTAACCACAATGTGGAGACTGTTTTAGACCTGTCTGATGATATGCCAAAGCTAGTTCGGGGTGATTCTGCTAGGGTAGTTCAAATATTTGCAAATTTGATCAACAACTCAATTAAGTTTACTCTATCCGGACATATTATTCTGAGAGGATGGTGTGAAAACCCAAATTCTTGCGGCAATAATACAAATTTTCCTCTAGAGCAAAAGAAATCAAGGTGTTCACAGAAGACCAGAGCAAAGCAACATGAAAACCATGTAAAGAGGACTTCTAATAGAGATAACAAAATGATACTTTGGTTTGAAGTTGATGACACAGGCTGTGGTATTGACCCAAGTAAATGGGAATCTGTGTTTGAAAGCTTTGAGCAAGCTGATCCATCAACTACTAGACTGCACGGAGGCACTGGTCTTGGTCTTTGCATCGTCAGAACCTTGGTTAATAAGATGGGTGGAGAAATCAAGGTTGTCAAAAAGGAGGGTCCAGGAACACTGATGAGATTATGCTTGCGTCTCAGTGCACCTGTGGATGCCACAGAACAACATTGTCAAAAAAACGGTGTGGTCACTTTGGAGGCACCAGAATGGAATGGATTAACACAAATTCTTAGGGTACTCTTTCATGCAAGAAGTTCAGCTCATAATAATAATGGCTTTGATGCAAATTATTCAGTGCATGACAATTTAAAGTCAAGACTACTGAGCATACAGGAATTGAGGAACCCAGTTTTTATCATTGCTGTTGACATTGGACTACTTGACTTGAGCACAGATATATGGAAGGAACAGCTCAATTTCCTTCACAAATACTTTGGGAGAGCAAAATTTGTGTGGATACTAAACCATGACTCCTCCAATACCATAAAGATGGAGCTTTGCAAGAAAGGACATACACTGACAGTGAACAAACCCCTTTACAAAACAAAAATCATTCATATTTTGGAAGCCATCATAAAGGAGAGAAATGATGAGCTACAAAAGAAAAATATGACTACTCCCTCAAGAGCTACTGTGAAACAGGGTGATTTGCATGAGAGTCTTGAGATTGATTATACTCAATGTGATGTTGTAAGCTCAGATGGTTCTGACATATCCGAAGCGGGTGGTTCTAATCCTGTTAGTGCCAGTGGAGATAAACAAAGAGAGAAGTTATTGAAATCCTATCCATCATCACAACAGCACCAGATAAATAACTTAGTTGGATTAACAAATGAATACATGGAAGATAATAATCATAGGAAAGAAGGGTTATGTCAGAGCAGCCTCAACTCTAATGATGTCACAACAAAATCATCCTCCACTAAACAAGCATCAACAGGCGCTCGAGATGAAGATTTTGAATATGGTGAAACACGTAGGGCCAGTAGCTCAAGTAGAGCAGTGAGTGGAAAGAAATCTCTTGAAGGTTTGAGGATATTGCTTGCAGAAGATACACCAGTAATTCAAAGGGTTGCAACCATAATGCTTGAAAAAATGGGAGCCGTTGTTGTAGCTGTAGGTGATGGACAACAGGCTGTGGATGCTCTGAATGGCATGCCTGGTGTTGAAGATTGTAGAAGGGAGTCTCTCCTGAAGGAAAGAAACACAACGTCTCAAACTGAGATTCTCATCAGTTGCCCTCCATATGATTTGATCCTAATGGATTGTCAGATGCCAAAGATGGATGGCTATGAGGCAACAAAAGCAATCAGGAAATCAGAAGTGGGAACTAGCTTGCACATTCCAATTGTTGCTCTTACAGCTCATGCGATGTCATGTGATGAAGCCAAGTGCCTAGAGGTTGGCATGGATGCTTATTTAACAAAGCCAATCGACTTCAAACTGATGGAATCAACCATTCTTTCACTCACAAGAAGGACATCCTAA 3459 0.416 MPITGRRIFHRDVEKEEFQYASTQCLSSYYSVFVVRLAIMAMLAILIGLLTFLTWHFTKIYTTKSLNSLAYDLRYELLQRPILRMWNILNSTAEITTAQMYDAMRAVTWALFASKKALNSITVKYKNGFVQAFHRDLKDNNTFYIYSDLANHSTVAGGYNEMNPRLSREAWNDKGIHGIHKPAIWYREPLDPVSGEKIGKVMPIAPEDSINIAGLSQVPDGVASWHVAVSKFTDSPLLSAALPVWDSSNKSIVAVVGVTTALYSVGQLMKELVEMHSGHMYLTSQEGYLLATSTNAPLLSNSTKPPKLKMAVECENEVIREGAQWLQKTYGNNFPQSHELHVENVRLGRQQYYIDSFFLNLKRLPLVGVIIIPRKHIMGQADERAFKTLVILISASLCIIVIGCVCILILTNGVSKEMKLRAELISHLEARRKAEASSNYKSQFLANMSHELRTPMAAVIGLLDILISDDHLTNEQCATVTQIRKCSTALLRLLNNILDLSKVESGKLVLEDAEFDLGRELEGLVDMFSVQCINHNVETVLDLSDDMPKLVRGDSARVVQIFANLINNSIKFTLSGHIILRGWCENPNSCGNNTNFPLEQKKSRCSQKTRAKQHENHVKRTSNRDNKMILWFEVDDTGCGIDPSKWESVFESFEQADPSTTRLHGGTGLGLCIVRTLVNKMGGEIKVVKKEGPGTLMRLCLRLSAPVDATEQHCQKNGVVTLEAPEWNGLTQILRVLFHARSSAHNNNGFDANYSVHDNLKSRLLSIQELRNPVFIIAVDIGLLDLSTDIWKEQLNFLHKYFGRAKFVWILNHDSSNTIKMELCKKGHTLTVNKPLYKTKIIHILEAIIKERNDELQKKNMTTPSRATVKQGDLHESLEIDYTQCDVVSSDGSDISEAGGSNPVSASGDKQREKLLKSYPSSQQHQINNLVGLTNEYMEDNNHRKEGLCQSSLNSNDVTTKSSSTKQASTGARDEDFEYGETRRASSSSRAVSGKKSLEGLRILLAEDTPVIQRVATIMLEKMGAVVVAVGDGQQAVDALNGMPGVEDCRRESLLKERNTTSQTEILISCPPYDLILMDCQMPKMDGYEATKAIRKSEVGTSLHIPIVALTAHAMSCDEAKCLEVGMDAYLTKPIDFKLMESTILSLTRRTS 1152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1098 1152 MobiDBLite consensus disorder prediction 891 911 - -
Aed7g1098 1152 MobiDBLite consensus disorder prediction 947 991 - -
Aed7g1098 1152 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 495 702 IPR036890 -
Aed7g1098 1152 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 427 507 IPR036097 GO:0000155|GO:0007165
Aed7g1098 1152 PANTHER OSMOSENSOR HISTIDINE KINASE 3 100 - -
Aed7g1098 1152 PANTHER OSMOSENSOR HISTIDINE KINASE 99 715 - -
Aed7g1098 1152 ProSiteProfiles Response regulatory domain profile. 1002 1148 IPR001789 GO:0000160
Aed7g1098 1152 SMART HisKA_10 440 506 IPR003661 GO:0000155|GO:0007165
Aed7g1098 1152 ProSiteProfiles Histidine kinase domain profile. 447 705 IPR005467 -
Aed7g1098 1152 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 553 703 IPR003594 -
Aed7g1098 1152 SMART HKATPase_4 553 705 IPR003594 -
Aed7g1098 1152 SMART REC_2 1001 1144 IPR001789 GO:0000160
Aed7g1098 1152 CDD REC_hyHK_CKI1_RcsC-like 1003 1144 - -
Aed7g1098 1152 Gene3D - 508 706 IPR036890 -
Aed7g1098 1152 Gene3D - 428 507 - -
Aed7g1098 1152 Gene3D - 980 1147 - -
Aed7g1098 1152 PANTHER TWO-COMPONENT HISTIDINE KINASE 99 715 - -
Aed7g1098 1152 Pfam Response regulator receiver domain 1072 1141 IPR001789 GO:0000160
Aed7g1098 1152 PRINTS Bacterial sensor protein C-terminal signature 630 644 IPR004358 GO:0016310|GO:0016772
Aed7g1098 1152 PRINTS Bacterial sensor protein C-terminal signature 665 683 IPR004358 GO:0016310|GO:0016772
Aed7g1098 1152 PRINTS Bacterial sensor protein C-terminal signature 648 658 IPR004358 GO:0016310|GO:0016772
Aed7g1098 1152 MobiDBLite consensus disorder prediction 891 908 - -
Aed7g1098 1152 MobiDBLite consensus disorder prediction 947 970 - -
Aed7g1098 1152 Pfam His Kinase A (phospho-acceptor) domain 441 506 IPR003661 GO:0000155|GO:0007165
Aed7g1098 1152 CDD HisKA 441 502 IPR003661 GO:0000155|GO:0007165
Aed7g1098 1152 PANTHER OSMOSENSOR HISTIDINE KINASE 715 1149 - -
Aed7g1098 1152 PANTHER TWO-COMPONENT HISTIDINE KINASE 3 100 - -
Aed7g1098 1152 PANTHER TWO-COMPONENT HISTIDINE KINASE 715 1149 - -
Aed7g1098 1152 SUPERFAMILY CheY-like 999 1150 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1098 Aed-Chr7 8662313 8669528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1098 8 1149 Histidine Kinase Gene Family AT2G17820 62.926 0.0 1454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aed7g1098 HATPase_c 2.2e-22 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1098 - - gmx:100801970 2063.11