Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1066 ATGTCTATCTTTCTCATCCTTGTGCTATTGTGCGCATGCTTCTTATCATGTGTCCACTGTGGCTCCGTGACGGAGATCCAAGCTTTAACGTCGTTCAAGCTCAACCTCCATGACCCTCTCGGTGCGCTTAACGGCTGGGATCCGTCAACGCCGTTAGCTCCGTGCGACTGGCGTGGCGTTTCGTGCAAGAATGACCGAGTTACCGAGTTACGCCTGCCTCGCCTTCAACTCAGTGGCCAACTCGGTGACCGCATTTCAGACCTGCGCATGCTTCGAAGGCTTAGCCTTCGTTCCAACTCCTTCAACGGCACCCTTCCTCGTTCGCTCTCCAAATGCACGCTCCTACGCGCCTTGTTTCTACAGTACAACTCGCTCTCCGGTGAACTCCCGCCGGAGATCGGAAACCTCGCTGGACTCCAGATTCTGAACGTCGCCGGTAACAACTTCTCCGGCGAAATCTCCGGCGAACTTCCTCTCCGTCTAAAATACATTGACCTCTCCGCGAATGCATTCTCCGGTGAGATTCCGAGCATCCTCGCTGGACTTTCCGAGATTCAGCTCATCAACCTCTCGTACAACAAGTTCTCCGGCCAGATTCCGGCGCGTATAGGAGAGCTTCAGAATCTGCAATACCTTTGGCTCGACCATAATGTTCTCGGAGGAACCTTGCCTTCGTCTCTCGCGAATTGTTCCTCACTCGTGCATTTCAGCGTCGAAGGGAACGCGCTGGCGGGGGTGCTGCCGGCGGCAATTCCAGCTCTCCCTAGCCTTCAGGTGTTGTCCCTCGCGCAAAACAATTTCACCGGTGCAGTTCCCGCTTCGGTTTTCTGCAATGTCTCGCTCAAAACGCCGTCGCTCCGCACGGTTCAGTTGGGGTTTAACTGTTTCACGGACTTCGCGTGGCCTCAAGCCGCCACAACGTGTTCCAGTGTTCTAGAAGTTTTGAACATTCAGCGTAATTGCGTGCACGGCAAGTTTCCGCTGTGGTTAACCAATGTGACCACATTGTCTATGCTCGATGTTTCAGGCAACTCGCTATCGGGTGAGATTCCACTAGAAATTGGACTTCTCAAGAATCTGGAGGAGTTGAAGATAGCCAACAATTCATTTTCCGGCAAGATTCCGGTAGAGATTGTGAAATGCAAGTCCCTGCGTACCGTTGATTTTGAAGGTAACAAATTCTCTGGCGAAGTTCCTACTTTTTTCGGTGATCTCACAGGGCTGAAGGTTCTGTCTCTTGGTGTGAACTATTTCTCTGGTTCTGTTCCTGTGAGTTTTGGTCAGCTTGCATCTCTTGAAACCTTGAGTTTAAGGGATAATAGATTGAATGGCACACTGCCAGAGGAGGTGATGGGATTGAAGAATTTGACAATATTAGACCTCAGTGGAAACAAATTTTCGGGTCATGTTTATGGGAGAATTGGGAATTTGAGTAAATTGATGATTCTGAATCTGAGTGGCAATGGCTTCTACGGAGAAATCCCTTCTACTTTGGGGAATCTTTTTCATCTCACTACACTTGACTTGAGTAGACAAAATCTCTCTGGTGAATTGCCGTTTGAAATTTCAGGGCTTCCCAGTTTGCAGGTTATTGCTCTTCAAGAGAACAAGTTGTCTGGGGTGATCCCCGAAGGGTTAAGCAGCTTGACCAGTTTGAAACACGTGAACCTAAGCTCCAATGAGTTTTCTGGACATGTTCCTAAGAACTATGGATTTCTTCGTTCACTGGTTGCTCTTTCATTGTCCAATAACCTCATCACAGGAATGATTCCACCAACAATTGGAAACTGCTCTGACATCGAAATTCTCGAGCTTGGATCAAATTACTTGGAGGGTCACATTCCTTCAGATCTCTCTAGCCTTTCCCATTTGAAAGTGCTTGATTTGGGTAAGAACAATTTAACAGGAGCTTTGCCTGAAAGTATCTCCAAATGCTCATGGTTAAGTGTTTTGTTAGCAGATCACAACCAACTCTCCGGTGCTATACCAGAGTCATTGGCAGAGTTATCATACCTAACAAAGCTGGATCTCTCTGCCAACAAATTCAGTGGAGAAATCCCAAGCAATCTAAACAGAATCCCCGGTTTGGAGTACTTCAATGTCTCGCACAATAATCTAGAAGGTGAGATTCCATCAACGTTGGGTTCTAAATTCAACAATCCCTCTGTATTTGCAAACAACAATAATTTATGCGGGAAGCCACTGGATAAAAAGTGCGAAAAAACAGCCAGTGTGGAGAGAAAAAGGTTGATAGTGCTGATCATCATCATAGCAGTTGGAGCTTGCTTATCAGCACTGTGTTGCTGTTTCTACATCATCGGTTTACTCAGGTGGCGCAGAAGGATCAAAGCAGCGGTGTCCGGGGAGAAGAAAAAGAGTCCAAGAACAAGCTCAGGAACAAGCCAAAGCCGCAGCAGCACCGACTCCAACGGTCCAAAGCTCGTAATGTTCAACACCAAAATCACGCTCGCGGAAACAATCGAAGCAACGAGGCAATTCGATGAAGAAAACGTGCTGAGCAGAACAAAACACGGGCTAGTATTCAAAGCCTGCTACAACGACGGAATCGTCCTCTCAGTTCGCAAGCTCCAAGACGGATCGCTCGACGAGAACGTGTTCCGAAAAGAAGCGGAGTCCATAGGCCGAATCAGGCACCGAAACCTAACCGTTCTGAGAGGCTACTACGCCGGTCCACCGGACGTTAAACTCTTGGTATACGATTACATGCCCAACGGAAACCTCGCAACGTTGCTCCAAGAAGCTTCTCACTTAGACGGCCATGTTCTGAATTGGCCAATGCGACACCTCATCGCGTTGGGAATCGCGCGTGGAATCGCGTTTCTGCACCAGTCCTTACTCATCCACGGCGACATCAAGCCGCAAAACGTGCTTTTCGACGCGGACTTCGAAGCACATTTATCAGATTTCGGGTTAGACAAGTTAACGGTGACGACCACGACCACAACGACAACGACGATGGTCGAAGCCTCGACTTCGAGCACTGCTTCGGTTGGGACGTTGGGTTACGTGTCACCCGAAGCGAGCATAACGGGGGAAGCAACTAAGGAGTGTGACGTGTACAGCTTCGGGATCGTGTTGCTGGAGCTTCTGACGGGGAAGAGGCCAGTGATGTTCACGCAGGACGAGGATATTGTGAAGTGGGTGAAGAAGCGGCTTCAGAAGGGGCAAATAACGGAGCTGTTGGAGCCGGGTTTGTTTGAACTTGACCCGGAATCTTCGGAGTGGGAAGAGTTTTTATTGGGTGTGAAAGTGGGTTTGCTTTGCACTGCACCGGATCCTCTCGATCGACCGACCATGGCTGATATTGTGTTCATGCTCGAAGGTTGTCGTGTTGGACCGGACATTGCTTCCTCCGCTGATCCCACCACGCAACCTTCTCCGGTGTAA 3408 0.4915 MSIFLILVLLCACFLSCVHCGSVTEIQALTSFKLNLHDPLGALNGWDPSTPLAPCDWRGVSCKNDRVTELRLPRLQLSGQLGDRISDLRMLRRLSLRSNSFNGTLPRSLSKCTLLRALFLQYNSLSGELPPEIGNLAGLQILNVAGNNFSGEISGELPLRLKYIDLSANAFSGEIPSILAGLSEIQLINLSYNKFSGQIPARIGELQNLQYLWLDHNVLGGTLPSSLANCSSLVHFSVEGNALAGVLPAAIPALPSLQVLSLAQNNFTGAVPASVFCNVSLKTPSLRTVQLGFNCFTDFAWPQAATTCSSVLEVLNIQRNCVHGKFPLWLTNVTTLSMLDVSGNSLSGEIPLEIGLLKNLEELKIANNSFSGKIPVEIVKCKSLRTVDFEGNKFSGEVPTFFGDLTGLKVLSLGVNYFSGSVPVSFGQLASLETLSLRDNRLNGTLPEEVMGLKNLTILDLSGNKFSGHVYGRIGNLSKLMILNLSGNGFYGEIPSTLGNLFHLTTLDLSRQNLSGELPFEISGLPSLQVIALQENKLSGVIPEGLSSLTSLKHVNLSSNEFSGHVPKNYGFLRSLVALSLSNNLITGMIPPTIGNCSDIEILELGSNYLEGHIPSDLSSLSHLKVLDLGKNNLTGALPESISKCSWLSVLLADHNQLSGAIPESLAELSYLTKLDLSANKFSGEIPSNLNRIPGLEYFNVSHNNLEGEIPSTLGSKFNNPSVFANNNNLCGKPLDKKCEKTASVERKRLIVLIIIIAVGACLSALCCCFYIIGLLRWRRRIKAAVSGEKKKSPRTSSGTSQSRSSTDSNGPKLVMFNTKITLAETIEATRQFDEENVLSRTKHGLVFKACYNDGIVLSVRKLQDGSLDENVFRKEAESIGRIRHRNLTVLRGYYAGPPDVKLLVYDYMPNGNLATLLQEASHLDGHVLNWPMRHLIALGIARGIAFLHQSLLIHGDIKPQNVLFDADFEAHLSDFGLDKLTVTTTTTTTTTMVEASTSSTASVGTLGYVSPEASITGEATKECDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKRLQKGQITELLEPGLFELDPESSEWEEFLLGVKVGLLCTAPDPLDRPTMADIVFMLEGCRVGPDIASSADPTTQPSPV 1135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1066 1135 Gene3D Transferase(Phosphotransferase) domain 1 909 1124 - -
Aed7g1066 1135 MobiDBLite consensus disorder prediction 791 813 - -
Aed7g1066 1135 Gene3D Ribonuclease Inhibitor 280 472 IPR032675 -
Aed7g1066 1135 ProSiteProfiles Protein kinase domain profile. 833 1122 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g1066 1135 Gene3D Ribonuclease Inhibitor 473 747 IPR032675 -
Aed7g1066 1135 SMART LRR_sd22_2 669 692 - -
Aed7g1066 1135 SMART LRR_sd22_2 429 452 - -
Aed7g1066 1135 SMART LRR_sd22_2 333 362 - -
Aed7g1066 1135 SMART LRR_sd22_2 621 644 - -
Aed7g1066 1135 SMART LRR_sd22_2 158 184 - -
Aed7g1066 1135 SMART LRR_sd22_2 453 479 - -
Aed7g1066 1135 SMART LRR_sd22_2 206 229 - -
Aed7g1066 1135 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 3 1131 - -
Aed7g1066 1135 SUPERFAMILY L domain-like 23 351 - -
Aed7g1066 1135 SUPERFAMILY RNI-like 399 733 - -
Aed7g1066 1135 Pfam Protein kinase domain 845 1109 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g1066 1135 MobiDBLite consensus disorder prediction 787 813 - -
Aed7g1066 1135 Pfam Leucine rich repeat N-terminal domain 25 62 IPR013210 -
Aed7g1066 1135 SUPERFAMILY Protein kinase-like (PK-like) 812 1120 IPR011009 -
Aed7g1066 1135 SMART LRR_typ_2 573 597 IPR003591 -
Aed7g1066 1135 SMART LRR_typ_2 429 453 IPR003591 -
Aed7g1066 1135 SMART LRR_typ_2 525 549 IPR003591 -
Aed7g1066 1135 SMART LRR_typ_2 477 501 IPR003591 -
Aed7g1066 1135 SMART LRR_typ_2 254 278 IPR003591 -
Aed7g1066 1135 SMART LRR_typ_2 357 381 IPR003591 -
Aed7g1066 1135 SMART LRR_typ_2 405 428 IPR003591 -
Aed7g1066 1135 SMART LRR_typ_2 206 230 IPR003591 -
Aed7g1066 1135 SMART LRR_typ_2 621 645 IPR003591 -
Aed7g1066 1135 SMART LRR_typ_2 88 112 IPR003591 -
Aed7g1066 1135 SMART LRR_typ_2 693 717 IPR003591 -
Aed7g1066 1135 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR KINASE XIAO-RELATED 3 1131 - -
Aed7g1066 1135 Gene3D Ribonuclease Inhibitor 23 164 IPR032675 -
Aed7g1066 1135 Gene3D Phosphorylase Kinase; domain 1 795 908 - -
Aed7g1066 1135 Gene3D Ribonuclease Inhibitor 165 279 IPR032675 -
Aed7g1066 1135 SMART serkin_6 833 1112 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g1066 1135 Pfam Leucine rich repeat 503 561 IPR001611 GO:0005515
Aed7g1066 1135 Pfam Leucine rich repeat 399 442 IPR001611 GO:0005515
Aed7g1066 1135 Pfam Leucine rich repeat 574 634 IPR001611 GO:0005515
Aed7g1066 1135 ProSitePatterns Serine/Threonine protein kinases active-site signature. 953 965 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1066 Aed-Chr7 8347020 8350427 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1066 1 1135 Receptor kinase-like Gene Family AT4G36180 64.572 0.0 1429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Aed7g1066 Pkinase 7.8e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1066 - - gmx:100804785 1975.67