Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1046 ATGGCGGGGTTATTCTCATTAAGCGGAGGGCGAGGTGGCGGCAGCAGCAACAACAACAACCAGCAACCAGAAAACAACGAGATTCCACCTCCGGAGACGATACTCTGGTACAGCAAAAACGACGACGTTTCCTCCTACAATCGAGGGTTTGAGCTATGGAACCAGCCAGAGCAACAGCAGCAGCACCATCCTCACGTGATGCATCATCATCATCATCATCCACATGCTGCGCGTCCGCTCCTGCAGCGAGATCTTTACTCCTCCGGAGGGGTGGGGCCCAGTCGCGGCGTCTCCGATGACCACTCGTCGTCTCGATCGGCGGCGGCGTTCGTGGCGATGCGAGCCGCGGCGGCCTCGGAGGGAGGAATAAGCTGCCAGGACTGCGGGAACCAAGCGAAGAAAGACTGCCCTCACATGCGATGCAGGACATGCTGCAAGAGCCGCGGCTACGACTGCCAAACCCATCTCAAAAGCACATGGGTTCCCGCTTCCAAACGCCGCGAGCGTTTACAACAGCTCGCGGCGTTACAGGAACAGCAACAGCAACAACAGCAGAGAGACATCTCCAAGCGGCCGAGAGACTCGGCCGCTTGCACCACCCGTTTGCCCTCGTCAGGTAATACATGA 627 0.5837 MAGLFSLSGGRGGGSSNNNNQQPENNEIPPPETILWYSKNDDVSSYNRGFELWNQPEQQQQHHPHVMHHHHHHPHAARPLLQRDLYSSGGVGPSRGVSDDHSSSRSAAAFVAMRAAAASEGGISCQDCGNQAKKDCPHMRCRTCCKSRGYDCQTHLKSTWVPASKRRERLQQLAALQEQQQQQQQRDISKRPRDSAACTTRLPSSGNT 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1046 208 MobiDBLite consensus disorder prediction 56 77 - -
Aed7g1046 208 MobiDBLite consensus disorder prediction 1 35 - -
Aed7g1046 208 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 189 IPR007818 GO:0003700|GO:0006355
Aed7g1046 208 MobiDBLite consensus disorder prediction 176 208 - -
Aed7g1046 208 PANTHER TRANSCRIPTION FACTOR STY-LRP1 FAMILY-RELATED 1 189 - -
Aed7g1046 208 MobiDBLite consensus disorder prediction 10 28 - -
Aed7g1046 208 Coils Coil 166 187 - -
Aed7g1046 208 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 124 166 IPR006510 -
Aed7g1046 208 Pfam Domain of unknown function (DUF702) 122 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1046 Aed-Chr7 8069767 8070393 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1046 1 204 C2H2 Transcription Factor Family AT3G51060 42.917 6.18e-39 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Aed7g1046 DUF702 1.1e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1046 - - gmx:100781981 216.083