Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1036 ATGTGTGTGATTTTTGTTCGCAGCAATAATGGTTATAATAACAACAGTGGGTTTCTAACTGAGAGCTTCACAAATTCAAGAGATCAGCTACTACAGCACAAGCATGCCATGACTGATTCACTTAGAATTTCAACAAGGCAAGCCTTTGGTTTTCACAATGGATCAACAAAAAGCCTCACTCATCAGCATGCTATGGAGGAACCACCATCATCACTGGTCCCAATTCATGAACCAAGATCATATTCTTCTCCTAGTTTCTTATTATCTAATCTTACTGTAACTGGTGAAGAGTTTTTTCCTAATGATCCTCACAAGCCTATAGAAGGAGGGACCCTAATAAGCAAGAGATACAATAGTATTAATAACTTTGGAGATGTTGCCTTAATTTCAAATTTACCAACCCTAGACATGGCCTCTTCCTTAGTTTCATGTTCTTTGGGCTTAAATAATAAAATGTTTGATCTTCATGCAAGTTATGGAATCCAACCTTGTTATGATACTACTTTTGGTCTTAACAAGAGCATTTCTTTGAGTCATCACAGCGACATGCATGGCCACCAAAACAGTCCATCAAACACCTCAAATAAAATTTCATCATTTGTAAGTGAAGTTGCAACAACAAAAAGGCCTAGCATTAATTGCTCTCTACCAAAAGATTCAGAAGCAAAAGCTAAGAAGTCAAGGCCATCATGCCCGCCCCTGAAGGTAAGAAAGGAAAAACTGGGGGATAGGATCCAAACTCTTCAGAGACTAGTGGCACCTTTCGGAAAGACCAGCACAGCCTCTGTCTTGAGTGAAGCCATTGGCTACATCCATTTTCTTCACCAACAAATCCAGACTTTGAGCATTCCTTACATGAAATCCGCGCAAAGCAAGCCTTCTAGAATGGTGCAGTTGGATTCAAATAAGGTAGATAGCAGAGAATTGAAGCCAGACCTTAGAAGCAGAGGCTTGTGTCTTGTGCCTCTTTCTTACGCATCAGTTATTCATCGTTGTGTTTAG 1002 0.3982 MCVIFVRSNNGYNNNSGFLTESFTNSRDQLLQHKHAMTDSLRISTRQAFGFHNGSTKSLTHQHAMEEPPSSLVPIHEPRSYSSPSFLLSNLTVTGEEFFPNDPHKPIEGGTLISKRYNSINNFGDVALISNLPTLDMASSLVSCSLGLNNKMFDLHASYGIQPCYDTTFGLNKSISLSHHSDMHGHQNSPSNTSNKISSFVSEVATTKRPSINCSLPKDSEAKAKKSRPSCPPLKVRKEKLGDRIQTLQRLVAPFGKTSTASVLSEAIGYIHFLHQQIQTLSIPYMKSAQSKPSRMVQLDSNKVDSRELKPDLRSRGLCLVPLSYASVIHRCV 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1036 333 MobiDBLite consensus disorder prediction 212 235 - -
Aed7g1036 333 MobiDBLite consensus disorder prediction 219 235 - -
Aed7g1036 333 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 7 329 - -
Aed7g1036 333 Gene3D - 235 298 IPR036638 GO:0046983
Aed7g1036 333 PANTHER TRANSCRIPTION FACTOR BHLH110-LIKE 7 329 - -
Aed7g1036 333 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 235 287 IPR036638 GO:0046983
Aed7g1036 333 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 225 274 IPR011598 GO:0046983
Aed7g1036 333 CDD bHLH_AtbHLH_like 235 282 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1036 Aed-Chr7 7974058 7976292 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1036 218 324 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 61.947 2.24e-36 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1036 - - gmx:100785177 466.077