Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1014 ATGGCGTCATCTTGGACCACAAGGCAAAACAAACTATTTGAAAGAGCTCTGGCTAAGTATGATAGAGAAACACCCGATAGGTGGCAGAATGTTGCCAATGAGGTGGGAAAATCGGTTGAGGAGGTTAAAAGGCACTATGAGATCCTCAAAGAAGATATCAGACGCATTGAGCATGGCCAAGTCATTGATCCAGAATCCAACAAACTTGAAGAATGA 216 0.4306 MASSWTTRQNKLFERALAKYDRETPDRWQNVANEVGKSVEEVKRHYEILKEDIRRIEHGQVIDPESNKLEE 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1014 71 SMART sant 1 52 IPR001005 -
Aed7g1014 71 Gene3D - 3 52 - -
Aed7g1014 71 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 64 - -
Aed7g1014 71 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 64 IPR044636 GO:0003700
Aed7g1014 71 SUPERFAMILY Homeodomain-like 3 57 IPR009057 -
Aed7g1014 71 CDD SANT 4 50 IPR001005 -
Aed7g1014 71 ProSiteProfiles SANT domain profile. 1 54 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1014 Aed-Chr7 7796642 7797378 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aed7g1014 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1014 - - pvu:PHAVU_003G254400g 116.701
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1288 11 17888823 17889729 Aed7g1014 7 7796642 7797378 PCT