Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1012 ATGGAGTTGAGAGAGCAAGATCATAATAAGGTAATAGAGATGCCTACTACCACTTTGGGTTATAACCTTCCCAATAGAAACTCTTCTTCTTCTTCCAAACTATCGTCACCAATATTAGGAGAAGAAAGAAGTGACCAACGTCCTCAATCTCACGCACTAATTTTCACTGATCCACTCCAAACTTCTTCTTCACATCTCTATCCACCAAACCCTCCAATTCTACAACCTCACAGACCCAGAAGAGATCCAGATCCAAGTCCTATTATTATTTCTCCTCCTCCAACAACAACAACAACATTTAGATACCGAGAATGTCTGAAGAACCATGCTGCAAGCATGGGTGGTCATGTCACAGATGGGTGTGGAGAGTTCATGCCAAATGGAGAAGAGGGCACCCCAGAATCCTTCAAGTGTGCAGCTTGTGAGTGCCACCGCAATTTCCACAGAAAAGAACCTCAAGGACTAGTACTAGAGTTGTCACAACAACAACAACAACATGTTCTCAACTATCACCACCACAAAAACAATAATAGGAGCATTCTTCAGTTTCCTACACCACAGTACTCTCATCTAAATCTTCATGGGATGGTGGCGGCCACCACCATCCCTTCTGGTGGGCCTGTTCAGCCCGTGATGTTGGGCTTTGGGGGAGGCCCAGCTGAGTCCTCAAGCGAAGATCTCAACATGTTTCATCAGACCAATAACTTGTTATCATCATCACCAGTGCAGGTGCCAGTGCCACCACTCTCATCATGTTCCAATAGGAAGAGGTTCAGGACCAAGTTCACACAGCAACAGAAAGATAGGATGGTTGAGTTTGCTGAGAAAGTGGGGTGGAAGATCCAGAAGCAAGATGAACAGGAACTGCATCAGTTCTGCTCCCAGGTTGGTGTAAAAAGACAGGTTTTTAAGGTTTGGATGCACAACAGCAAGCAAGCCATGAAGAAGAAGCCAATGCAAGCCTAG 966 0.4524 MELREQDHNKVIEMPTTTLGYNLPNRNSSSSSKLSSPILGEERSDQRPQSHALIFTDPLQTSSSHLYPPNPPILQPHRPRRDPDPSPIIISPPPTTTTTFRYRECLKNHAASMGGHVTDGCGEFMPNGEEGTPESFKCAACECHRNFHRKEPQGLVLELSQQQQQHVLNYHHHKNNNRSILQFPTPQYSHLNLHGMVAATTIPSGGPVQPVMLGFGGGPAESSSEDLNMFHQTNNLLSSSPVQVPVPPLSSCSNRKRFRTKFTQQQKDRMVEFAEKVGWKIQKQDEQELHQFCSQVGVKRQVFKVWMHNSKQAMKKKPMQA 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1012 321 SUPERFAMILY Homeodomain-like 249 316 IPR009057 -
Aed7g1012 321 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 102 151 IPR006456 -
Aed7g1012 321 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 101 151 IPR006456 -
Aed7g1012 321 MobiDBLite consensus disorder prediction 1 95 - -
Aed7g1012 321 Pfam ZF-HD protein dimerisation region 100 152 IPR006456 -
Aed7g1012 321 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 255 312 IPR006455 -
Aed7g1012 321 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 63 317 - -
Aed7g1012 321 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 7 63 317 - -
Aed7g1012 321 MobiDBLite consensus disorder prediction 12 68 - -
Aed7g1012 321 Gene3D - 249 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1012 Aed-Chr7 7774565 7775530 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1012 72 319 ZF-HD Transcription Factor Family AT2G18350 44.841 1.93e-64 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Aed7g1012 ZF-HD_dimer 5.9e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1012 - - ccaj:109810490 390.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1291 11 17900376 17901377 Aed7g1012 7 7774565 7775530 PCT