Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0981 ATGAATCATCAACTTATCGAAGACCATATGATGCTCTTCTCTCAACTATACTCCAGTGCATTCACTGAAGCAACTCCTCAACAAGGTCTAAATCCATACTTAGAGAAATTTTTAACATTTTTTTCGTATATATATATTGATTCAATTCATTTGTATCTTTATGATATAGGGGAAAATAAGCCAAGGCGTAAGCGAAATAGAAAGAATAGAGGAGGGGTTAATTCGAAGAAGAGAAAGTTGAGCATAGAGCAAATGAGTCTTCTTGAGCAAAATTTCAGTGACGAACATAAACTTGAGTCCGAAAGGAAGGAGAGGCTCGCGTTGGAGCTTGGTTTGGACCCTCGACAAGTTGCCGTGTGGTTTCAAAATAGACGTTCTCGTTGGAAGACCAAAAAATTGGAGGAAGAATACTCCAATCTTAAGAATGCTCATGAAACTACTATGCTCCAAAAATGCCACCTTGAGAATGAGGTGTTGAAGCTGAAGGAGCAGCTTCTGGAAGCAAAGAAGGAGATAAAAGAGCTACTAGAGCGCGGTGGTGAAAAAGCCCAAAGCAACAGCTCCAGTTCCTCACAGTCATCAATGGAACTAGAAGCTCTGAACCCACCATTTCTTGGAGAATATGATGATGGTGGCGTGTTCTACATGCCAGACACCCATTACATCAATGGGATGGAATGGATTAATCTGTACATTTAA 699 0.402 MNHQLIEDHMMLFSQLYSSAFTEATPQQGLNPYLEKFLTFFSYIYIDSIHLYLYDIGENKPRRKRNRKNRGGVNSKKRKLSIEQMSLLEQNFSDEHKLESERKERLALELGLDPRQVAVWFQNRRSRWKTKKLEEEYSNLKNAHETTMLQKCHLENEVLKLKEQLLEAKKEIKELLERGGEKAQSNSSSSSQSSMELEALNPPFLGEYDDGGVFYMPDTHYINGMEWINLYI 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0981 232 CDD homeodomain 76 132 IPR001356 GO:0003677
Aed7g0981 232 MobiDBLite consensus disorder prediction 177 196 - -
Aed7g0981 232 Coils Coil 158 178 - -
Aed7g0981 232 PRINTS Lambda-repressor HTH signature 111 127 IPR000047 GO:0003677
Aed7g0981 232 PRINTS Lambda-repressor HTH signature 102 111 IPR000047 GO:0003677
Aed7g0981 232 ProSiteProfiles 'Homeobox' domain profile. 71 131 IPR001356 GO:0003677
Aed7g0981 232 MobiDBLite consensus disorder prediction 181 196 - -
Aed7g0981 232 Coils Coil 123 150 - -
Aed7g0981 232 ProSitePatterns 'Homeobox' domain signature. 106 129 IPR017970 GO:0000981|GO:0006355
Aed7g0981 232 SMART HOX_1 74 135 IPR001356 GO:0003677
Aed7g0981 232 Gene3D - 66 139 - -
Aed7g0981 232 SUPERFAMILY Homeodomain-like 76 140 IPR009057 -
Aed7g0981 232 Pfam Homeodomain 76 129 IPR001356 GO:0003677
Aed7g0981 232 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 39 231 IPR045224 GO:0003700
Aed7g0981 232 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-40-LIKE 39 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0981 Aed-Chr7 7531292 7532495 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0981 1 232 Homeobox Transcription Factor Family AT2G18550 45.020 1.16e-63 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Aed7g0981 Homeodomain 1.7e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0981 K09338 - gmx:100803948 246.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1328 11 18115347 18117402 Aed7g0981 7 7531292 7532495 PCT