Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0966 ATGGAAGTACTTCCTTGTTCTGGGGTTCAATATGCTGGGGGATCTGATTGCTCTCAGCCTACTTCAGGAACAACTTTTGTAAACCAGGGGGAAAGTGGTGAACAGGATAAACTGGAAGAAGATCAACTGAATGACTCATTACAAACGGAAGGGCCTCATATAGAAAGACAAGGTCAAACGCAACAGACAGTTTGTGAACTCTTGACTAATATAGATTGCCAATGTGGTGGAGCTTCATGTCGTGACTGTCAAGTGGAAGGCCTGAAGGAAGCTATTAGTTTCCATGATGTTGAAGATGATGGAATAAATGAACCTTGCTTAGCCTTTGAAAACTCTGTCTCTATTGCAGATACAAATGAAAGTGATTCACCAAATGATAGTAGGGAAGTAGAGCTTCCATTTTCTGAACCCACTTGGCTGAAGGGGGATGAGCCTGTGGCATTGTGGGTCAAGTGGAGAGGGAATTGGCAGGCTGGTATCAAATGTGCAAGGGCTGACTGGCCATTATCAACTTTAAAAGCAAAACCAACTCATGACAGGAAGAAATATTTTGTCATATTTTTTCCTCACACGAGGAATTATTCTTGGGCTGATATGCTGCTTGTTCAATCAATTTATAAGTTTCCCCAGCCTATTGCATACAAAACTCATCAAGTAGGATTGAAAATGGTAAAAGATTTGACTGTTGCACAGCGGTTTATAATGCAAAAGCTAGCCATAGGTGTACTGAGCATTGTTGATCAGCTTCATCCTAATGCCTTGCTAGAAACTGCTCGTGATGTGATGGTTTGGAAGGAATTTGCTATGGAGACTTCTCGTTGTAACAGTTATTCAGATTTTGGCAGAATGCTTCTAAAGTTACAAAATAGCATAGTGAAGCACTACTCTGATGCTGACTGGATACAACATTCATCTTACTCCTGGGCCGACCGATGCCGGAATGCAAATAGTGCTGAATCAGTAGAGCTACTGAAGGAGGAATTGTTTGGTTCTATTTTGTGGAATGATGTCAACACTCTTTGGGATACACTGGTGCAATCAACATTAGGTTCTGAGTGGAAAACCTGGAAGCATGATGTGATGAAATGGTTTTCCACATCACCTTCCTTCTCTAGCAGCAAGGATGTGCAGCAAATGACCTCTGATGGGTTGTTCCAAGTAAGCCTTCAGGTTGGTAGAAAAAGGCCCAAACTTGAAGTTCGTCGTGCAGATACGCATGCTACAGTGGTGGAAACAAATGGTTCAGATCACCCAATTACTCTTGAAACTGACCCATGTTTCTATAGGAATCAGGACACATTGAGTACATTAGCAGCTGAGACCTCTACACACAAAGATGTTAAGGAGGTACCTGTGGCAACTGATTTACCTAGTAATTTGACCAATAAATGGAATGAAATTGTAGTTGAGACTACTGATTCTGAGATCTTGCATGACAATGGGATGGAATCAACACCTATGAATGAGATGGCTGGTAGAAAAATTGTAGAACCTAGTACTAAAAGTCGACAATGCATAGCTTATGTTGAAGCCAAAGGAAGACAATGTGTGAGATGGGCAAATGATGGTGAGGTATACTGTTGTGCGCATTTGTCATCTCGTTTTTTGGGCAGCTCAGGGAAATCCGAAAAACCTGTTTCAGTTGATACTCCAATGTGTGGAGGTACAACTGTTCTTGGTACTAAATGTAAGCATCATGCCCTTCCTGACACTTCATTCTGTAAGAAACACTGTCCCCATGCTGAAACAGATGAGACCTCAAATATAACCCATAGTACACTGAAGAGAAAGCATGAAGAAAATCACATTGGTTCAGAGGGCTTGATCAGCAAAGACATGGTATTGATAAATGCTGGAAGTTCATTGCAGGGAGAACCAGTGCCAGCTGTTGGTGGTGATTCCTTCCTTGAAAGAAGCAAGATGCCCATCCTCTCTGGCAATGATCAGATTGCAATGGAGGCACTTCAATGTATAGGCTCTCCCCCTTATGATTGCAATGACCCCTGTTTAGAAGCACCAAAGCGGTATTTCTTGTATTGTGAAAAGCACCTTCCAAGCTGGCTAAAACGTGCAAGAAATGGAAAGAGTAGGATAATATCAAAAGAAGTGTTCACAGAAATTTTAAGGGACTGCTGCTCGTGGAAGAAAAAGGTGCACCTGCATAAAGCATGTGAGCTTTTCTACAGGCTATTGAAAAGCATTTTGTCACAAAGAAGCCCAGTTTCTAAGGAAGTTCAGTTCCAGCAGGCTTTAACTGAAGCCTCAAAAGATACTAGTGTTGGGGAATTCCTTACAAAGTTGGTTCATAGTGAAAAGGATAGAATCAAATTGATTTGGGGATTTAATGATGACATAGATGTATACTCACTCATGGAAGGACTACCTCTAGCTCCTTCCACAGATAATGACAATGACAGCTTTGATAATGAGAATATCATTAAGTGTAAGATTTGCTGTGCAAAATTTCCCAATGACCAAACTCTTGGGAACCATTGGATGGACAACCATAAAAAGGAAGCACAGTGGCTGTTCAGAGGCTATGCTTGTGCCATTTGTCTGGATTCTTTTACAAACAAGAAGCTATTGGAAACCCATGTTCAGGAGAGACACCACGTGCAATTTGTTGAACAGTGCTTGCTTCTCCAATGTATTCCTTGTGGTAGTCATTTTGGAAATATGGAGCAGTTATGGCTGCATGTTCTATCAGTCCATCCTGTTGAATTCAAGCCATTGAAAGCTCCTGAGCAGCAAACTTTGTGTTGTGAGGACTCTCGGGAAAAACTTGAGCAGGGGAATTCAGCTTCTTTGGAGAATAATTCCGAGAATCCAGGTGCTTTGCGGAGGTTTGTTTGCCAGTTTTGTGGGTTAAAATTTGATTTACTACCTGACCTGGGTCGCCATCATCAAGCTGCTCATATGGGCCACAATCTAGGTAGCAGCCGCTCTACAAAAAGGGGAGTTCGTCATTATACGCAGAGATTAAAATCTGGCAGACTTAGCCATCCTAGATTTAAAAATAGTTTGGCAGCAGCATCGTTTAGAATCAGGAATAGGGCTAATGCTGATTTAAAGAGACACATTCAGGCAACAAAGTCACTTGACATAGTGGAAACAACAATAAAACCTCATGTAACTGAGACAGCAAATATTGGTAACTTAGCAGAATATCAATGCTCAGCAGTTGCAAAGATTTTATTTTCTGAGATTCAGAAGACTAAACCACGGCCTAACAATCTTGATATCTTGTCAATTGGTCGTTCTGCATGCTGTAAAGTTAGTCTTAAAGCCTCACTGGAGGAGAAATGTGGAATTTTGCCTGAAAGACTCTATTTGAAAGCAGCAAAACTTTGCAGCGAGCATAACATTCTGGTGAATTGGCACCAGGATGGGTTTATTTGTCCTAGGGGTTGTAAGGTTTTGAAGGACCAAATGCATCTCTCTCCCTTAGCATCATTTTCTAATGGTTTCCTAAAGCCAAAATCTGTAATTTTATCGGATCCTGCAAGTGACGAGTTGGAGGTGGATGAGTTTCATTACATCATTGATTCACATCATTTAAAAGTAGGGTCCTTACAAAAGGTTACTGTCTTGTGTGGCGATATAAGCTTTGGGAAGGAATCAATTCCAGTGATTTGTGTAGCAGATCAAGATATTCTAAACTCTCTTCATAAGCATGGGTCCGATGAGAAAGATATAAATCTCTCTAGGCCTTGGGAGAGCTTTACTTATGTTACAAAGCCAATCCTTGATCAATCACTTAATCTTGATTCTGAGAGTCTGCAACTAGGATGTGCTTGCTCATTTTCTGCCTGCTGTCCTGAAACATGTGATCACATCTACCTTTTTGATAATGACTATGATGATGCAAAAGACATATTTGGGAAACCAATGTGTGGTAGGTTCCCATATGATGAGAATGGTCGAATAATATTGGAGGAAGGTTACCTTGTGTATGAATGTAACCAGATGTGCAAATGCTACAAAACCTGTCCAAACAGAATATTGCAGAATGGAATACGGGTTAAATTGGAAGTCTTTAAAACAGAGGAGAAGGGATGGGCAGTAAGGGCTGGTGAGGCTATCCTTCGTGGCACATTTGTGTGTGAGTACATTGGAGAGGTTTTAGATAAGCAGGAGGGACACAACCGGCACAAAAGATACGGCAAAGAACACTGCAGTTATTTCTTTGACGTTGATGATCATGTTAATGATATGAGCAGATTGATTGAAGGACAGGCACATTATGTCATTGATACTACTAGATTTGGAAATGTCTCTAGGTTCATCAATAACAGCTGCTCACCCAATCTTGTGAGTTACCAAGTTCTTGTAGAAAGCATGGATTGTGAGCGTGCACATATTGGTCTTTATGCAAATCGAGATATTGCTTTGGGTGAAGAATTGACATATGATTATCATTATGAGCTTGTGCCTGGAGAGGGATCTCATTGCCTTTGTGGTTCCACCAAGTGCCGCGGACGCTTGTACTAG 4491 0.4117 MEVLPCSGVQYAGGSDCSQPTSGTTFVNQGESGEQDKLEEDQLNDSLQTEGPHIERQGQTQQTVCELLTNIDCQCGGASCRDCQVEGLKEAISFHDVEDDGINEPCLAFENSVSIADTNESDSPNDSREVELPFSEPTWLKGDEPVALWVKWRGNWQAGIKCARADWPLSTLKAKPTHDRKKYFVIFFPHTRNYSWADMLLVQSIYKFPQPIAYKTHQVGLKMVKDLTVAQRFIMQKLAIGVLSIVDQLHPNALLETARDVMVWKEFAMETSRCNSYSDFGRMLLKLQNSIVKHYSDADWIQHSSYSWADRCRNANSAESVELLKEELFGSILWNDVNTLWDTLVQSTLGSEWKTWKHDVMKWFSTSPSFSSSKDVQQMTSDGLFQVSLQVGRKRPKLEVRRADTHATVVETNGSDHPITLETDPCFYRNQDTLSTLAAETSTHKDVKEVPVATDLPSNLTNKWNEIVVETTDSEILHDNGMESTPMNEMAGRKIVEPSTKSRQCIAYVEAKGRQCVRWANDGEVYCCAHLSSRFLGSSGKSEKPVSVDTPMCGGTTVLGTKCKHHALPDTSFCKKHCPHAETDETSNITHSTLKRKHEENHIGSEGLISKDMVLINAGSSLQGEPVPAVGGDSFLERSKMPILSGNDQIAMEALQCIGSPPYDCNDPCLEAPKRYFLYCEKHLPSWLKRARNGKSRIISKEVFTEILRDCCSWKKKVHLHKACELFYRLLKSILSQRSPVSKEVQFQQALTEASKDTSVGEFLTKLVHSEKDRIKLIWGFNDDIDVYSLMEGLPLAPSTDNDNDSFDNENIIKCKICCAKFPNDQTLGNHWMDNHKKEAQWLFRGYACAICLDSFTNKKLLETHVQERHHVQFVEQCLLLQCIPCGSHFGNMEQLWLHVLSVHPVEFKPLKAPEQQTLCCEDSREKLEQGNSASLENNSENPGALRRFVCQFCGLKFDLLPDLGRHHQAAHMGHNLGSSRSTKRGVRHYTQRLKSGRLSHPRFKNSLAAASFRIRNRANADLKRHIQATKSLDIVETTIKPHVTETANIGNLAEYQCSAVAKILFSEIQKTKPRPNNLDILSIGRSACCKVSLKASLEEKCGILPERLYLKAAKLCSEHNILVNWHQDGFICPRGCKVLKDQMHLSPLASFSNGFLKPKSVILSDPASDELEVDEFHYIIDSHHLKVGSLQKVTVLCGDISFGKESIPVICVADQDILNSLHKHGSDEKDINLSRPWESFTYVTKPILDQSLNLDSESLQLGCACSFSACCPETCDHIYLFDNDYDDAKDIFGKPMCGRFPYDENGRIILEEGYLVYECNQMCKCYKTCPNRILQNGIRVKLEVFKTEEKGWAVRAGEAILRGTFVCEYIGEVLDKQEGHNRHKRYGKEHCSYFFDVDDHVNDMSRLIEGQAHYVIDTTRFGNVSRFINNSCSPNLVSYQVLVESMDCERAHIGLYANRDIALGEELTYDYHYELVPGEGSHCLCGSTKCRGRLY 1496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0966 1496 SMART preset_2 1198 1325 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Aed7g0966 1496 MobiDBLite consensus disorder prediction 13 37 - -
Aed7g0966 1496 MobiDBLite consensus disorder prediction 13 32 - -
Aed7g0966 1496 ProSiteProfiles Zinc finger C2H2 type domain profile. 949 977 IPR013087 -
Aed7g0966 1496 ProSiteProfiles SET domain profile. 1341 1473 IPR001214 GO:0005515
Aed7g0966 1496 ProSitePatterns Zinc finger C2H2 type domain signature. 815 836 IPR013087 -
Aed7g0966 1496 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 1 1496 - -
Aed7g0966 1496 Gene3D Classic Zinc Finger 797 873 - -
Aed7g0966 1496 ProSiteProfiles Zinc finger C2H2 type domain profile. 847 870 IPR013087 -
Aed7g0966 1496 Pfam SET domain 1352 1472 IPR001214 GO:0005515
Aed7g0966 1496 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 1 1496 - -
Aed7g0966 1496 Gene3D SET domain 1180 1477 IPR046341 -
Aed7g0966 1496 ProSitePatterns Zinc finger C2H2 type domain signature. 951 972 IPR013087 -
Aed7g0966 1496 ProSitePatterns Zinc finger C2H2 type domain signature. 883 904 IPR013087 -
Aed7g0966 1496 Pfam Pre-SET motif 1201 1333 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Aed7g0966 1496 SUPERFAMILY SET domain 1190 1486 IPR046341 -
Aed7g0966 1496 SMART c2h2final6 847 870 IPR013087 -
Aed7g0966 1496 SMART c2h2final6 949 972 IPR013087 -
Aed7g0966 1496 SMART c2h2final6 813 836 IPR013087 -
Aed7g0966 1496 SMART c2h2final6 881 904 IPR013087 -
Aed7g0966 1496 Pfam Zinc finger C2H2-type, 3 repeats 849 973 IPR040689 -
Aed7g0966 1496 ProSiteProfiles Post-SET domain profile. 1480 1496 IPR003616 -
Aed7g0966 1496 SMART set_7 1341 1479 IPR001214 GO:0005515
Aed7g0966 1496 ProSiteProfiles Pre-SET domain profile. 1262 1338 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0966 Aed-Chr7 7339408 7352541 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0966 116 1495 C2H2 Transcription Factor Family AT2G23740 49.538 0.0 1324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Aed7g0966 Pre-SET 1.2e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0966 - - gmx:100815492 2761.1