Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0921 ATGGCGACGAGGTACTGGGTAGTGTCTCTCCCCGTTCATAATTCCGCATCCACTCCCTGGAACAAATTGCAGGATCAAATCTCCAAACACTCCTTCGACACTCCTCTCTACAGAGTACTACTCTCTCTCTCTCTCAACACATCACATTTTACTTTTCTCATTTTCCCTCCAAATTCGCAGTTCAACATCCCCAATCTCCGCGTCGGAACCCTAGACTCCCTCCTATCCCTCAGCGATGATCTCGTCAAGTCGAACAGTTTCGTGGAGGGAGTGTCGCACAAGATCAGGCGGCAGATTGAGGAGCTGGAGAGAGTGTCGGCCGTGGCGAGCAGTGGTTTGACGGTGGATGGAGTCCCTGTTGATTCCTACTTGACACGGTTTGTTTGGGATGAAGCTAGGTACCCGACTATGTCACCGTTGAAGGAGATCGTGGATGGGATTCACGGACAGGTCGCAAAGATTGAGGATGATCTCAAGGTTCGTGTTTCTGAGTATAACAATATCCGCAGTCAGTTTAATGCCATAAACCGAAAGCAAACTGGAAGCTTAGCTGTCCGCGATCTTTCCAACTTGGTAAAACCTGAGGATATTGTAACTTCAGAAAATTTAACTACCCTTCTTGCAATTGTTCCCAAGTATTCACAGAAGGATTGGCTCTCTAGCTATGAAACATTGACAAACTATGTGGTTCCCAGGTCTTCCAAAAACTTGTACGAGGATAACGAATATGCTCTTTATACTGTAACACTCTTCAGTCGTGTTGCAGACAATTTTAGAACTAGTGCACGGGAAAAAGGGTTCCAAATTCGTGATTTTGAACACAGTCCTGAATCACACGAGAGTAGGAAGCAAGAGTTAGAGAAATTGATTGAAGATCAGGAAAGTTTGAGGGGTTCTCTATTGCAGTGGTGTTGTACCAGTTATGGAGAGGTTTTCAGCTCCTGGATGCACTTTTGTGCAGTACGTGTATTTACTGAGAGCATTCTGAGATATGGTCTTCCACCATCTTTCTTGGCATGCGTTTTAGCTCCATCAGTCAAGGCTGAGAAGAAAGTACGTTCTATCCTTGAAGGGTTGAGCGATAGCACAAACAGTGGTTACTGGAAGGGCGAGGATGAAGGAGTTGGGATGGCTGGCCTAGCAAGTGATGGTGATGCCCACCCTTATGTCTCCTTCACTGTCAATGTTGTTTGA 1194 0.4598 MATRYWVVSLPVHNSASTPWNKLQDQISKHSFDTPLYRVLLSLSLNTSHFTFLIFPPNSQFNIPNLRVGTLDSLLSLSDDLVKSNSFVEGVSHKIRRQIEELERVSAVASSGLTVDGVPVDSYLTRFVWDEARYPTMSPLKEIVDGIHGQVAKIEDDLKVRVSEYNNIRSQFNAINRKQTGSLAVRDLSNLVKPEDIVTSENLTTLLAIVPKYSQKDWLSSYETLTNYVVPRSSKNLYEDNEYALYTVTLFSRVADNFRTSAREKGFQIRDFEHSPESHESRKQELEKLIEDQESLRGSLLQWCCTSYGEVFSSWMHFCAVRVFTESILRYGLPPSFLACVLAPSVKAEKKVRSILEGLSDSTNSGYWKGEDEGVGMAGLASDGDAHPYVSFTVNVV 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0921 397 Pfam V-ATPase subunit C 57 390 IPR004907 GO:0033180|GO:0046961|GO:1902600
Aed7g0921 397 Gene3D - 185 273 - -
Aed7g0921 397 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 57 396 - -
Aed7g0921 397 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 1 39 - -
Aed7g0921 397 SUPERFAMILY Vacuolar ATP synthase subunit C 2 395 IPR036132 GO:0015078|GO:0033180|GO:1902600
Aed7g0921 397 CDD V-ATPase_C 5 394 IPR004907 GO:0033180|GO:0046961|GO:1902600
Aed7g0921 397 Gene3D Vacuolar atp synthase subunit c; domain 1 59 356 - -
Aed7g0921 397 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 57 396 IPR004907 GO:0033180|GO:0046961|GO:1902600
Aed7g0921 397 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 1 39 IPR004907 GO:0033180|GO:0046961|GO:1902600
Aed7g0921 397 Gene3D - 63 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0921 Aed-Chr7 6970864 6976282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0921 1 396 Primary Pumps ATPases(2) AT1G12840 76.263 0.0 633
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0921 K02148 - gmx:100803728 684.1