Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0915 ATGCTTCCAACGAGAGTTCTCGCTGACGCTATTGTCGGCGTTCCCTGGACGGAGCCTGAAAACGACGTCGTTGCGGGGGACGCCGCTCTCTTACCTTCGTTCAAGTCAATGCTGGACGCCGGTGACTGGTACATGAACCAACCTTTGCCTCACTGTGATTTTCTCCAAAACGACGCGTTTTTGGAGCAGCCTTTGGAGGATTCAGAGTCTTTTTCTCTGCCTCAGCAGCAGCACTTCGTGGGGCCGCCGAAACCGTTCTTCTTCGACGTAAACGGTGAAGCCTCTTTTGAATGTGGCTTTGAGTTCGGTTCTCAGCGCGGTTTCCTCGCGCCGTTTCCCGTGAACGCGCTCGAGCTGAGTTCGAACCCCGAGTTTCCGGCGAGTCATCAACTCGGTGGCGGGTTGGCTCGGGGAGAGAAGCTGCGGCCTCTCGACGCACTTGCTCCACCCACTCTGTATCAGAAGCGGATGGAGCGGTGGCGAGAGACCGGGAAGGTGGAGGAATTGCCGCCGTTGGTGGTGGAGAGGAGGAGGAAGAGGGGAGGGTTGAATTATGAGTCTGGTGAGGGTGGTAAGTTGGAGGAGAATAGTGTTGATGCAAATAATAATGATGGGAATGGGAATGAGAATGGTGGTAGTGGTGGGGAGCAGAAGGGGAAGAAGAAGAATGGGATGCCGGCGAAGAATCTCGCGGCAGAGAGGAGGCGGAGGAAGAAGCTCAATGATAGGTTGTACATGCTTAGGTCTGTTGTGCCTAAGATTAGCAAGATGGATAGGGCTTCGATACTTGGGGATGCTGTTGACTACTTAAGGGAATTACAACGGCAGATTACTGATCTTAATAATGAACTAGAGTCAAGCCCGACAGGCTCATCTCTTACACCTTCTGCAAGCTTTCAACCTGTGACCCCCACTCTGACTACTCCTCCCTGCCGGGTGAAGGAAGAAATATGCCGTACCTCTCCTAAAAACCAATCAGCCAAGGTGGAGGTTAGGGTAAGGGAAGGAGGAGCTGTCAATGTCCATATGTTTTGTGCCTGCAGACCAGGTCTCTTACTTTCTACCATGAGGGCATTGGATAACCTTGGATTGGATGTTCAGCAGGCTGTTATCAGCTGTTTCGATGGTTTTGCTTTAGATGTGTTCAAAGCTGAGCAATGCCGAGAAGGCCAGGGTGTCCTTCCGGAGAAAATTAAAGCCGTACTGTTGGACGCAGCAGGTTTCCATGGAATGATGTGA 1239 0.5214 MLPTRVLADAIVGVPWTEPENDVVAGDAALLPSFKSMLDAGDWYMNQPLPHCDFLQNDAFLEQPLEDSESFSLPQQQHFVGPPKPFFFDVNGEASFECGFEFGSQRGFLAPFPVNALELSSNPEFPASHQLGGGLARGEKLRPLDALAPPTLYQKRMERWRETGKVEELPPLVVERRRKRGGLNYESGEGGKLEENSVDANNNDGNGNENGGSGGEQKGKKKNGMPAKNLAAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAVDYLRELQRQITDLNNELESSPTGSSLTPSASFQPVTPTLTTPPCRVKEEICRTSPKNQSAKVEVRVREGGAVNVHMFCACRPGLLLSTMRALDNLGLDVQQAVISCFDGFALDVFKAEQCREGQGVLPEKIKAVLLDAAGFHGMM 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0915 412 MobiDBLite consensus disorder prediction 221 237 - -
Aed7g0915 412 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 227 290 IPR036638 GO:0046983
Aed7g0915 412 MobiDBLite consensus disorder prediction 183 237 - -
Aed7g0915 412 Coils Coil 263 283 - -
Aed7g0915 412 Gene3D - 216 287 IPR036638 GO:0046983
Aed7g0915 412 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 224 273 IPR011598 GO:0046983
Aed7g0915 412 MobiDBLite consensus disorder prediction 196 213 - -
Aed7g0915 412 CDD bHLH_AtAMS_like 227 292 - -
Aed7g0915 412 Pfam Helix-loop-helix DNA-binding domain 231 274 IPR011598 GO:0046983
Aed7g0915 412 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 97 412 - -
Aed7g0915 412 SMART finulus 230 279 IPR011598 GO:0046983
Aed7g0915 412 MobiDBLite consensus disorder prediction 283 306 - -
Aed7g0915 412 PANTHER BHLH TRANSCRIPTIONAL FACTOR 97 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0915 Aed-Chr7 6896138 6899685 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0915 34 385 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 44.912 1.04e-84 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aed7g0915 HLH 2.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0915 - - gsj:114390091 560.451