Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0912 ATGAGTACCAACGAAAACAGCACCTTCTTCCCCACCCTACATGGCCAGATAAGCACTTCTGAATTTGTTACTAGCCAGAATCATCCATCCAAGCCTTCAAATCAAGGTAACATTGATGATATAAGGAAAAAGCACTATAGAGGAGTTAGGCAGAGGCCATGGGGAAAATGGGCAGCAGAAATAAGAGACCCTAAGAAAGCAGCTAGAGTGTGGCTTGGAACCTTTGACACAGCAGAAGCTGCAGCCATGGCTTATGATGCTGCTGCATTGAGGTTCAAAGGAAACAAAGCCAAGCTCAATTTTCCAGAACGTGTTGCTATGCCAATGGCACCACCACCACCAACAACCAACAACAATAACACTTCTTCATCAGCTCCTACTACACAAACACAAACTAGTAGCAGCAATAATAGTAGTTCTTTTTCATCAGAAGGGTTTCCGAATCTCGAGGAGTATGCAAGGTTGTTGAATTGTAGCGATGATGATGACTTTCATCGTGTTGCATTGGGGCTCTATCAACATCAGAATAATAGTGAGGATTTTATTAATTATGGTTCATCACAGCCACCACCACCGGTGCCGTTTTTTGTGTCTTCTTCTTCTTCTGCAATGGCGCCATCGTCCACTTATTCTGGATTTTTCGGACAAGGAGGGAGTGGTTTTGGTGAAGGGAACAAGAGGGGGTCGTAG 690 0.442 MSTNENSTFFPTLHGQISTSEFVTSQNHPSKPSNQGNIDDIRKKHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAMAYDAAALRFKGNKAKLNFPERVAMPMAPPPPTTNNNNTSSSAPTTQTQTSSSNNSSSFSSEGFPNLEEYARLLNCSDDDDFHRVALGLYQHQNNSEDFINYGSSQPPPPVPFFVSSSSSAMAPSSTYSGFFGQGGSGFGEGNKRGS 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0912 229 SMART rav1_2 45 108 IPR001471 GO:0003700|GO:0006355
Aed7g0912 229 MobiDBLite consensus disorder prediction 116 144 - -
Aed7g0912 229 PANTHER AP2/ERF DOMAIN-CONTAINING TRANSCRIPTION FACTOR-LIKE PROTEIN ISOFORM 2 15 226 - -
Aed7g0912 229 MobiDBLite consensus disorder prediction 105 144 - -
Aed7g0912 229 CDD AP2 44 103 IPR001471 GO:0003700|GO:0006355
Aed7g0912 229 PANTHER DNA-BINDING DOMAIN 15 226 IPR044808 GO:0003700|GO:0009873
Aed7g0912 229 MobiDBLite consensus disorder prediction 18 36 - -
Aed7g0912 229 Pfam AP2 domain 45 94 IPR001471 GO:0003700|GO:0006355
Aed7g0912 229 SUPERFAMILY DNA-binding domain 45 103 IPR016177 GO:0003677
Aed7g0912 229 ProSiteProfiles AP2/ERF domain profile. 45 102 IPR001471 GO:0003700|GO:0006355
Aed7g0912 229 Gene3D AP2/ERF domain 44 104 IPR036955 GO:0003700|GO:0006355
Aed7g0912 229 PRINTS Ethylene responsive element binding protein signature 46 57 IPR001471 GO:0003700|GO:0006355
Aed7g0912 229 PRINTS Ethylene responsive element binding protein signature 68 84 IPR001471 GO:0003700|GO:0006355
Aed7g0912 229 MobiDBLite consensus disorder prediction 18 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0912 Aed-Chr7 6879305 6881694 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0912 40 107 AP2-EREBP Transcription Factor Family AT5G61890 83.824 2.37e-39 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Aed7g0912 AP2 4.6e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0912 - - gmx:100806383 270.781