Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0902 ATGAATCCCTACACGTCATCACCATCGTCCTCCAAGTCCAAAAAGAAGCAAACAACAGCACAACAAGATCATGAGACGGCATGGGGAGGAAGGTACCTTGGGGTGAGGAGGAGGCCTTGGGGAAGGTACGCCGCTGAAATTCGCGACCCTTCCACCAAGGAAAGACACTGGCTGGGCACGTTCGACACTGCAGAAGAGGCTGCCCTGGCATATGACAGGGCAGCCCGCTCCATGCGCGGGTCGCGTGCCCGAACCAACTTCGTTTATCCGGACACCCCTCCGGGTTCCTCTGTCACCTCCATCCTCTCCCCAGACGAGCAAACCCAAACTCAAATTCAAATCCATCAGGCTCAGGAAGAGCTCTCATCTTTATTCAACCAACGCTCATTTCCTCAACCCGACCCAAACCCGCAATTCTCCTTATGCGGGTATTCGGGTATGGCGAACACTCCTACATTTTCCGCCACCGAAGAAATTGCCTCATCCGGTGGTGGCTATAGCTATAGTTATGGGTACACCGAGGGAGGAACCAACGTGGAGAGTTCACATTTTAATCTCTTTGATGATGGTGAAACGCAGCTTCCACCATTGCCACCGGATATCACAAGCTCCATGGGCTATGATGAAATGGGTAATGGGTTTTATGGAAACGAGTTTGGGTTTTCGGATCCAAGTTTCGGTTCAAATTCCACCGGATCGGGTTACCCATATCCGGGTTTTGAATCCGGTGATTACGTGGCGCATAGCCCACTTTTTAGCGCAATGCCACCAGTGTCAGATAAGGTGGGAACGGGTCATGAGGGTTTTGATTTGGGAAGCTCTTCTTATTTCTTCTGA 837 0.5137 MNPYTSSPSSSKSKKKQTTAQQDHETAWGGRYLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAALAYDRAARSMRGSRARTNFVYPDTPPGSSVTSILSPDEQTQTQIQIHQAQEELSSLFNQRSFPQPDPNPQFSLCGYSGMANTPTFSATEEIASSGGGYSYSYGYTEGGTNVESSHFNLFDDGETQLPPLPPDITSSMGYDEMGNGFYGNEFGFSDPSFGSNSTGSGYPYPGFESGDYVAHSPLFSAMPPVSDKVGTGHEGFDLGSSSYFF 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0902 278 ProSiteProfiles AP2/ERF domain profile. 31 88 IPR001471 GO:0003700|GO:0006355
Aed7g0902 278 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 9 278 - -
Aed7g0902 278 MobiDBLite consensus disorder prediction 1 31 - -
Aed7g0902 278 CDD AP2 31 87 IPR001471 GO:0003700|GO:0006355
Aed7g0902 278 SMART rav1_2 31 94 IPR001471 GO:0003700|GO:0006355
Aed7g0902 278 MobiDBLite consensus disorder prediction 1 16 - -
Aed7g0902 278 Pfam AP2 domain 32 80 IPR001471 GO:0003700|GO:0006355
Aed7g0902 278 PRINTS Ethylene responsive element binding protein signature 32 43 IPR001471 GO:0003700|GO:0006355
Aed7g0902 278 PRINTS Ethylene responsive element binding protein signature 54 70 IPR001471 GO:0003700|GO:0006355
Aed7g0902 278 Gene3D AP2/ERF domain 30 89 IPR036955 GO:0003700|GO:0006355
Aed7g0902 278 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR LEP 9 278 - -
Aed7g0902 278 SUPERFAMILY DNA-binding domain 31 88 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0902 Aed-Chr7 6795389 6796225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0902 9 269 AP2-EREBP Transcription Factor Family AT5G13910 44.697 1.05e-50 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aed7g0902 AP2 1.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0902 K09286 - gmx:100809600 466.848