LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed7g0901	CATGCAAAGTTTAGTTTACTCCCTAATCAACAAGCAATTGATGAGGAGCTGTCATGCTACAAATATGTTCCCTCATCATCACAGGCTGTGGCATCATCATCTTCATTGCAGAGGCTTTTGGAGAATCATAGAAGTTTGAAAACAGCTTTGCTGGTTGTGGTGTTGCTTGGTGCTTGCATGGTCATTGGTGATGGTGTGTTTTGTCCAGCAATGTCAATTCTAGCGTCAGTATCAGGAGTACAAGTTACCAAAACAACAAAATTGACTGATGGAACTGAAGCTATGTTTGCAGATATTGGTGACTTTACTACATTGTCAATAAGGCTTGCATTTACCTTTGTTATATACCCTTGTTTGGTAGTGCAATACATGGGCCAGGCAGCTTTTTTGTCAAAAAACCTCAACTCTGTTGAGAATAGTTTTTATGACTCTATACCGGGCCTTGCTTGTATGGCAGTTATGTCCGTGACAACATTTCTGATGGCACTAGTCATAATCTTTGTATGGCAGAAAAGCATCCTCATTGCTGCAATATTCCTTTTGTTCTTTTGGGTGATAGAGGGTGTATATCTATCAGCAGCATTGATAAAAGTATTGCAAGGAGGATGGGCTCCTCTTGTCTTATCTTTCTTCATCATGCTTGTTATGTATGTATGGCATTATGGTACTCGTATCAAGTACAACTACGACTTATGCAACAAAGTTTCATTGAAATGGTTGCTTGCATTAGGCCCTAGCCTCGGTGTTGCTCGTGTCCCCGGGATCGGTCTCATCTACACAGAACTTACATCAGGAATACCTGCAGTATTTTCCCACTTTGTAACCAACCTCCCTGCATTCCACATGGTGTTGGTCTTTGTTTGTGTGAAAACAGTTCCTGTCCCACATGTCTCACCCGAAGAACGCTTCCTAATCGGGCGAGTTTGTCCGAGACCATATCGAATGTATCGGTGCACTGTCAGATATGGATACAAGGAGATCAGAAAGGATGATAGAGACTTTGAGAGCCATATCATACGGTGTATAGCCGAGTTTATCCAAAAGGAGGCACAGGAATTACAATTCCTCTCATGTTCTGAAACCTCTTCATTTGAAGGGGAGGCTACTGTTATAAGTGTTAGAAGCTTGGAATCATCTTCAAGTTGGACAGTGTCTGAGACTGAAGATATTGGTGTGGACAACGACGACGAGGACGACGACAACAACAATGCTAGTGGTAGTAGATCTTTCTCCCTAAGACGACCGCTTTGCAACGGAGAAACTAAGCAACACCCGAGAAGGCGCCAAATGAGTTTTCGGATACCTAATGATCCTGCATTGGATGATGATGTTAGGGAAGAGCTTATTGATTTAGGCCAAGCTATGGAGTGTGGGGTTGCATACATAACGGGGAACACACATGTGAGGGCAAGGAAATCATCCTCACTCTTGAAAAGGCTTATGATCAATGTGGGTTATGCATTTCTATGA	1470	0.4259	HAKFSLLPNQQAIDEELSCYKYVPSSSQAVASSSSLQRLLENHRSLKTALLVVVLLGACMVIGDGVFCPAMSILASVSGVQVTKTTKLTDGTEAMFADIGDFTTLSIRLAFTFVIYPCLVVQYMGQAAFLSKNLNSVENSFYDSIPGLACMAVMSVTTFLMALVIIFVWQKSILIAAIFLLFFWVIEGVYLSAALIKVLQGGWAPLVLSFFIMLVMYVWHYGTRIKYNYDLCNKVSLKWLLALGPSLGVARVPGIGLIYTELTSGIPAVFSHFVTNLPAFHMVLVFVCVKTVPVPHVSPEERFLIGRVCPRPYRMYRCTVRYGYKEIRKDDRDFESHIIRCIAEFIQKEAQELQFLSCSETSSFEGEATVISVRSLESSSSWTVSETEDIGVDNDDEDDDNNNASGSRSFSLRRPLCNGETKQHPRRRQMSFRIPNDPALDDDVREELIDLGQAMECGVAYITGNTHVRARKSSSLLKRLMINVGYAFL	489

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed7g0901	489	Pfam	K+ potassium transporter	147	326	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Aed7g0901	489	Pfam	K+ potassium transporter	34	85	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Aed7g0901	489	MobiDBLite	consensus disorder prediction	384	437	-	-
	Aed7g0901	489	PANTHER	POTASSIUM TRANSPORTER 4	90	146	-	-
	Aed7g0901	489	PANTHER	POTASSIUM TRANSPORTER 4	147	489	-	-
	Aed7g0901	489	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	90	146	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Aed7g0901	489	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	147	489	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Aed7g0901	489	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	1	87	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Aed7g0901	489	PANTHER	POTASSIUM TRANSPORTER 4	1	87	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed7g0901	Aed-Chr7	6789652	6793530	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aed7g0901	1	91	Inorganic Solute Cotransporters	AT3G02050	59.341	4.00e-20	92.0

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed7g0901	K03549		-	gmx:100810134	510.76