Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0868 ATGTATAAGCATGAGCCTAATGTGATGGAGGTTCTATACAGAGTTCAATTTTGTATAGACTCGGCTTTGGACTATGATGTGTTATGCAAGATATTCAAAATCTGGGTGGGCGAGCAATTGAATGAACCTCCAAAGGGATTTTGGGCTTCATTGTTGAACTTCAACTGCTTAGTGTCTCTCTTCATTGGTCTATGGATTTTGGACAGCATCAAAGGTCACAAGCTGATATTGAGGAGTTTGAAGCAAACTATAGGGGATCTGACACAGAAAAATGATTTGATTGATCTGTACAAGAAGTGCAAGGGGACTGTCCACCTGATATTAATGAAGCAGTGTCAAGTATCATGTTTGCTTCTGCAAGATGTGGAGATTTTCCTGAGCTCTATATCATTAGGAAGCTCTTTGTACAGCGTTATGGTGAAAGAACATGAAGGGAATCAATTAGTGGAAAGTGATGGCCAAATGAACAACACAATTTCAGAGACAGGAAGTGATAATACATTCGACAGTTCTTCCATAACAAAGCCAAGTGACTTTTTTTCTCTGTCAGAGTCTACCTCAGCTGAAAATAATTCTGCATTGGTGTGTGGTGAAGAAGTGGATAAAGTTTTGTGGCACATGATATTCACCAATTCTTCATCAGAAATAGTTAGTTTGCTTCCATGTGCTGAAGCAACGGTAGAGTACGACGTTGAAGAGATTGAAGAATTCATTGGCGTGGACAAAGGATCTCATGGAAAGAATATTGATTTTTCTGAGCAGATACCAGTAAGTGAGGCTTATTTGGGTCGTGTTATAAATGCCTTGGCTAAACCGATTGATAGTCGAGGAGAAATTTCAGCTTCGAAATCTCGATTAATAGAATCTCCTGCTCCCGGTATTATTTCGAGACGTTCCGTATATGAGCCTCTCCAAACAGGACTTATTGCTATTGATTCGATGATCCCCATAGGACGTGGCCAGCGAGAATTAATTATAGGCGACAGACAAACAGGTAAAACAGCAGTAGCCACAGATACAATTCTCAATCAACAGGGACAAAATGTAATATGTGTTTATGTAGCTGTTGGTCAAAAAGCATCTTCTGTGGCTCAAGTGGTGACTACCTTACAAGAAAGAGGAGCAATGGAATACACTATTGTAGTAGCTGAAACAGCGGATTCTCTAGCTATATTACAATACCTCGCCCCTTATGCAGGAGCAGCTTTGGCTGAATATTTTATGTACCGTGAACGTCACACTTTAATTATTTATGACGATCTCTCCAAACAAGCACAGGCTTATCGCCAAATGTCTCTTCTATTACGAAGACCACCAGGTCGCGAAGCTTATCCAGGGGATGTTTTTTATTTACATTTGCGTCTTTTGGAAAGAGCCGCTAAATTAAGTTCTCAGTTAGGCAAAGGAAGTATGACTGCTTTACCTATAGTTGAAACTCAATCGGGAGATGTTTCAGCTTATATTCCTACTAATGTAATTTCCATTACAGATGGCCAAATATTCTTATCTGCCAATCTATTCAATGCTGGAATCAAACCCGCTATTAATGTTGGTATTTCGATTTCCAGAGTTGGATTGGCGGCTCAAATTAAAGCCATGAAACAAGTAGCTGGTAAATTAAAATTGGAATTAGCACAATTTGCAGAATTAGAAGCTTTTGCCCAATTTGCTTCTGATCTCGATAAAGCTACGCAAAATCAATTAGCAAGAGGTCAACGATTGTGCGAGTTGCTTAAACAATCCCAATCAGCTCCTCTTACCATGGAAGAATAG 1773 0.3954 MYKHEPNVMEVLYRVQFCIDSALDYDVLCKIFKIWVGEQLNEPPKGFWASLLNFNCLVSLFIGLWILDSIKGHKLILRSLKQTIGDLTQKNDLIDLYKKCKGTVHLILMKQCQVSCLLLQDVEIFLSSISLGSSLYSVMVKEHEGNQLVESDGQMNNTISETGSDNTFDSSSITKPSDFFSLSESTSAENNSALVCGEEVDKVLWHMIFTNSSSEIVSLLPCAEATVEYDVEEIEEFIGVDKGSHGKNIDFSEQIPVSEAYLGRVINALAKPIDSRGEISASKSRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAVGQKASSVAQVVTTLQERGAMEYTIVVAETADSLAILQYLAPYAGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHLRLLERAAKLSSQLGKGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSANLFNAGIKPAINVGISISRVGLAAQIKAMKQVAGKLKLELAQFAELEAFAQFASDLDKATQNQLARGQRLCELLKQSQSAPLTMEE 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0868 590 TIGRFAM atpA: ATP synthase F1, alpha subunit 237 589 IPR005294 GO:0015986|GO:0045261|GO:0046933
Aed7g0868 590 CDD F1_ATPase_alpha 254 525 IPR033732 GO:0032559
Aed7g0868 590 PANTHER ATP SYNTHASE SUBUNIT ALPHA, CHLOROPLASTIC 240 590 - -
Aed7g0868 590 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 254 525 IPR027417 -
Aed7g0868 590 PANTHER ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL 240 590 - -
Aed7g0868 590 CDD ATP-synt_F1_alpha_C 533 590 IPR000793 GO:0015986
Aed7g0868 590 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 307 522 IPR000194 GO:0005524
Aed7g0868 590 Gene3D - 530 590 IPR038376 -
Aed7g0868 590 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 530 590 - -
Aed7g0868 590 Pfam ATP synthase alpha/beta chain, C terminal domain 529 590 IPR000793 GO:0015986
Aed7g0868 590 Gene3D - 253 529 IPR027417 -
Aed7g0868 590 ProSitePatterns ATP synthase alpha and beta subunits signature. 513 522 IPR020003 GO:0005524
Aed7g0868 590 Hamap ATP synthase subunit alpha [atpA]. 107 590 IPR005294 GO:0015986|GO:0045261|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0868 Aed-Chr7 6570457 6577739 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0868 254 524 Primary Pumps ATPases(2) AT4G38510 30.556 9.99e-28 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0868 K02111 - gmx:121173224 595.119