Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0864 ATGTACTATCAGCAGCAGCAGCAACAAGCTAAGAACATGCAGGCTTTAAGGATGCATAGCCCCACTGAGAGGCATATGATGATGCAAGGAGGCAATGGAGGTGGTGATTCAGGACTTGTTCTCTCAACTGATGCTAAGCCTAGACTAAAATGGACACCAGATCTTCACGAACGATTCATAGAAGCAGTTAATCAACTTGGAGGAGCAGACAAAGCTACGCCAAAAACAGTATTGAAACTAATGGGGATTCCTGGACTTACTCTCTACCACTTAAAGAGTCATCTACAGAAGTACAGGATCAGTAAAAATATGCATGGACAAACCAATACCAGCAACAATAAAACAGCATCAACCACAGAAGCAGCAGGCAGAATATCAGAAGCAAGTGGAATTCAAATGAAACATTTAAGCATAGGTCTCCAGACAAACAAAAATTCAGAAATAAATGATGCATTACAGATGCAAATTGAAGTGCAAAGAAGACTGCATGAGCAGCTTGAGGTACAGAGACACTTACAACTAAGGATAGAGGCACAAGGGAAGTACCTTCAGACAGTGTTGGAAAAAGCACAAGAGACACTAGGAAGACAGAATTTGGGTTCTGAGGGAGTTGAAGCAGCAAAAGTTCAACTATCTGAACTTGCATCAAGAGTATCCCCTCAAAGCCTTGACTCTAAATTTTCAGAACTGAAGGAACTGCAGGTTTTGTGGCCTCAGCAAACACAAGAAGGCCAAGCTACTGATTGTTCAATGGGAAGTTTCTTAACCTATAGTGAGGAATCCCAAAGAGACAGAGAAACACATAACATGAACTTGAATTTGAGAGCCTATAATAATGGCCCTCCATTTCCAGTTTCAAAAGGGTGTGCAGAAGAGTCTATGCATTTAAAGCCTGCTCACGCATTGTGTGATGAAGTGAAGGAGAATATGATGTTTCGTTCCTCATCAAGTGATAGTAAAGTAGTGAAAGGAGGAGATTTTTTACCAGAAAGGCCCTCAAGCCTCTTATCCATGAATGTAGGAGTTCAAGAAGAGAAAAAATGTTGGAAGGGAAGAGAGAGCACTGAAAGTGGAAGAGTGGCAGTTAAATTGAACCATGAGAAGATTTCTCAAGATTATAGGCTTGCTAACTTTGAAGTGAAACTGGACCTGAATTCTCATGATGATAATGATTCCTCTTCCCACTGCCAACAGTTTGATTTGAATGGTTTCAGCTGGAATTGCTAG 1227 0.4099 MYYQQQQQQAKNMQALRMHSPTERHMMMQGGNGGGDSGLVLSTDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVLKLMGIPGLTLYHLKSHLQKYRISKNMHGQTNTSNNKTASTTEAAGRISEASGIQMKHLSIGLQTNKNSEINDALQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQTVLEKAQETLGRQNLGSEGVEAAKVQLSELASRVSPQSLDSKFSELKELQVLWPQQTQEGQATDCSMGSFLTYSEESQRDRETHNMNLNLRAYNNGPPFPVSKGCAEESMHLKPAHALCDEVKENMMFRSSSSDSKVVKGGDFLPERPSSLLSMNVGVQEEKKCWKGRESTESGRVAVKLNHEKISQDYRLANFEVKLDLNSHDDNDSSSHCQQFDLNGFSWNC 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0864 408 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 43 103 IPR017930 -
Aed7g0864 408 Pfam MYB-CC type transfactor, LHEQLE motif 147 193 IPR025756 -
Aed7g0864 408 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 5 407 - -
Aed7g0864 408 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 5 407 IPR044848 GO:0003700
Aed7g0864 408 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 46 101 IPR006447 GO:0003677
Aed7g0864 408 Coils Coil 149 169 - -
Aed7g0864 408 Pfam Myb-like DNA-binding domain 48 99 IPR001005 -
Aed7g0864 408 Gene3D - 45 103 - -
Aed7g0864 408 SUPERFAMILY Homeodomain-like 45 101 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0864 Aed-Chr7 6534711 6538457 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0864 78 407 G2-like Transcription Factor Family AT3G04030 48.640 9.77e-86 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aed7g0864 Myb_DNA-binding 4.7e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0864 - - gmx:100786282 686.797