Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0844 ATGGAAATTCAATTTCAGCATCCAAAGAGAGCATGCACATCAAAAGAAGGAGGCAAATTCAAAGGGAGAAACAATAACAACAACAACAACAACAAAAGAAAAAGAAGCAACAAGTATGTTGGGGTGAGGCAAAGAGCATCAGGGAAATGGGTTGCTGAGATCAAAGACACAACACAAAAGATAAGAATGTGGCTTGGCACATACGACACACCTGAGGAAGCAGCAAGGGCCTATGATGAAGCTGCATGCCTCCTTCGTGGATCCAACACTCGCACCAACTTCATCACACATTCTCATCAGAAAAATCCTTCATGGGGTTTTGTTGAACCTTCTTCTTTTGATCGTTTTCCATTTAGCCAATTAGTAATGGATGTGACAAACCTTCCTGATATAGCAGCTGGCTTGGAGCTTCCAGATTTTGAAAGGATGAAAGTTGAAAGGCAAATATCAGCTTCACTTTATGCAATCAATGCAAGATCCTCCCTGGCTTCTGAGAACTCACCTTCTTCCATTCCTTCACTAATATACCAATGCACAAAGGCCCTTTTGGTAAACATGAGGTCAAACTTGTGGTCAATGCGAGAGAAAACCTCAGCCACCGCTGTGTTGTTGCTTATCATACAAACTGCTCTCTCCACCTTTGCAAGATCACCTTCTGCAAGGTTTACATCTTTTGGCACAACATCGCCGCGATACATGAGGCAGCATGCCATGTACTTGCCATGTCTTGGATCACACTTGACCATCATGCTTGATGGCTCAAACACAGCTCTGGTGATCTCAGGCACAGACAGCTGCTCATGGTAG 807 0.4374 MEIQFQHPKRACTSKEGGKFKGRNNNNNNNNKRKRSNKYVGVRQRASGKWVAEIKDTTQKIRMWLGTYDTPEEAARAYDEAACLLRGSNTRTNFITHSHQKNPSWGFVEPSSFDRFPFSQLVMDVTNLPDIAAGLELPDFERMKVERQISASLYAINARSSLASENSPSSIPSLIYQCTKALLVNMRSNLWSMREKTSATAVLLLIIQTALSTFARSPSARFTSFGTTSPRYMRQHAMYLPCLGSHLTIMLDGSNTALVISGTDSCSW 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0844 268 MobiDBLite consensus disorder prediction 1 40 - -
Aed7g0844 268 CDD AP2 39 94 IPR001471 GO:0003700|GO:0006355
Aed7g0844 268 ProSiteProfiles AP2/ERF domain profile. 38 95 IPR001471 GO:0003700|GO:0006355
Aed7g0844 268 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERN2 13 103 - -
Aed7g0844 268 Pfam AP2 domain 38 87 IPR001471 GO:0003700|GO:0006355
Aed7g0844 268 SUPERFAMILY DNA-binding domain 38 95 IPR016177 GO:0003677
Aed7g0844 268 SMART rav1_2 38 101 IPR001471 GO:0003700|GO:0006355
Aed7g0844 268 Gene3D AP2/ERF domain 37 96 IPR036955 GO:0003700|GO:0006355
Aed7g0844 268 MobiDBLite consensus disorder prediction 19 35 - -
Aed7g0844 268 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 13 103 - -
Aed7g0844 268 PRINTS Ethylene responsive element binding protein signature 39 50 IPR001471 GO:0003700|GO:0006355
Aed7g0844 268 PRINTS Ethylene responsive element binding protein signature 61 77 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0844 Aed-Chr7 6412249 6415305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0844 38 97 AP2-EREBP Transcription Factor Family AT5G19790 88.333 3.15e-32 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aed7g0844 AP2 2.3e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0844 K09286 - gmx:100792432 147.902
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1010 9 7283499 7284335 Aed7g0844 7 6412249 6415305 PCT