Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0835 ATGGAAAGTAATTTCCATCAGTACCATGAACCTCCTCCAGCACCATTGATTGATGCTGCGGAATTTATTCAGTGGTCCTTCTACAGGGCCGTGATTGCTGAGTTCATTGCCACACTGCTCTTCCTTTACATCACAGTGCTCACAGTGATTGGTTACAAGAGCCAGAGTGATGTCAAAGTTGGGGGTGATGTGTGTGCTGGAGTTGACATTCTTGGCATTGCTTGGGCCTTTGGTGGCATGATCTTCGTTCTGGTGTACTGCACTGCTGGAATCTCAGGAGGTCACATAAACCCAGCAGTGACATTTGGGCTGTTCTTGGCTCGCAAGGTGTCTTTGGTTAGAGCTATACTGTACATGGTGGCTCAGTGCTTGGGAGCCATATGTGGAGTTGGGTTGGTTAAGGCCTTCCAAAAGGCTCACTACAGCATGTATGGTGGTGGAGCCAATGAGCTGAGTGAAGGGTACAGCAAAGGTGTTGGATTGGGTTCTGAGATCATTGGAACCTTTGTTTTGGTTTACACTGTCCTCTCTGCTACTGACCCCAAGAGGAAAGCTAGAGATTCTCACGTGCCGGTTTTGGCTCCACTTCCAATTGGGTTTGCTGTGTTCATTGTTCACTTGGCAACCTTCCCAGTAACAGGCACTGGCATTAACCCTGCTAGGAGTCTAGGAGCTGCTGTCATGTACAACCAAAACAAGGCCTGGAATGACCATTGGATCTTTTGGGTTGGACCATTTACTGGAGCAGCAATTGCAGCCTTCTACCACCAATTCATCTTGAGAGCAGGTGCTGCTAAGGCTCTTGGATCATTCCGGAGCACCCCCAGTACTATTTGA 837 0.4851 MESNFHQYHEPPPAPLIDAAEFIQWSFYRAVIAEFIATLLFLYITVLTVIGYKSQSDVKVGGDVCAGVDILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYMVAQCLGAICGVGLVKAFQKAHYSMYGGGANELSEGYSKGVGLGSEIIGTFVLVYTVLSATDPKRKARDSHVPVLAPLPIGFAVFIVHLATFPVTGTGINPARSLGAAVMYNQNKAWNDHWIFWVGPFTGAAIAAFYHQFILRAGAAKALGSFRSTPSTI 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0835 278 ProSitePatterns MIP family signature. 95 103 IPR022357 -
Aed7g0835 278 Gene3D Glycerol uptake facilitator protein. 14 277 IPR023271 -
Aed7g0835 278 TIGRFAM MIP: MIP family channel proteins 33 256 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed7g0835 278 PRINTS Major intrinsic protein family signature 199 221 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed7g0835 278 PRINTS Major intrinsic protein family signature 29 48 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed7g0835 278 PRINTS Major intrinsic protein family signature 239 259 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed7g0835 278 PRINTS Major intrinsic protein family signature 114 133 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed7g0835 278 PRINTS Major intrinsic protein family signature 163 181 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed7g0835 278 PRINTS Major intrinsic protein family signature 77 101 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed7g0835 278 Pfam Major intrinsic protein 23 256 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed7g0835 278 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 5 274 IPR034294 -
Aed7g0835 278 SUPERFAMILY Aquaporin-like 21 261 IPR023271 -
Aed7g0835 278 PANTHER AQUAPORIN PIP2-4-RELATED 5 274 - -
Aed7g0835 278 CDD MIP 29 259 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0835 Aed-Chr7 6360788 6364604 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0835 6 273 Major Intrinsic Protein MIP AT2G37170 79.851 8.40e-163 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0835 K09872 - gmx:547857 503.442