Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0834 ATGGCTAAGCATGATGCTGAGGGTGGTTCCTTCTCTGCCAAGGACTACCATGACCCTCCTCCAGCACCATTGATTGATGCTGAAGAACTCACACAGTGGTCCTTCTACAGAGCCTTGATTGCTGAATTCATTGCTACACTGCTGTTCCTTTACATCACAGTGCTCACAGTGATTGGTTACAAGAGCCAGAGTGATGTCAAGGCTGGGGGTGATGTGTGTGGTGGAGTTGGCATTCTTGGCATTGCTTGGGCCTTTGGTGGCATGATCTTCATTCTGGTGTACTGCACTGCTGGAATCTCAGGTGGTCACATAAACCCAGCAGTGACATTTGGGCTGTTCTTGGCTCGCAAGGTGTCTTTGATAAGAGCCATAATGTACATGGTGGCTCAGTGCTTGGGAGCCATATGTGGAGTTGGGTTGGTTAAGGCCTTCCAAAGTGCTTATTACAACAGGTATGGTGGTGGAGCCAATGAGCTGAGTGAAGGGTACAGCAAAGGTGTTGGATTGGGTGCTGAGATCATTGGAACCTTTGTTTTGGTATACACTGTCTTCTCTGCAACTGACCCCAAGAGGAATGCTAGAGATTCTCACGTGCCGGTTTTGGCTCCACTTCCAATTGGGTTTGCTGTGTTCATGGTTCACTTGGCAACCATCCCAGTAACAGGCACTGGCATTAACCCTGCTAGGAGTCTAGGAGCTGCTGTCATAGCAGGTGCTGCTAAGGCTCTTGGATCATTCAGGAGCACCCCCAGTACTATTTGA 762 0.4921 MAKHDAEGGSFSAKDYHDPPPAPLIDAEELTQWSFYRALIAEFIATLLFLYITVLTVIGYKSQSDVKAGGDVCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAIMYMVAQCLGAICGVGLVKAFQSAYYNRYGGGANELSEGYSKGVGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIAGAAKALGSFRSTPSTI 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0834 253 Pfam Major intrinsic protein 29 239 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed7g0834 253 CDD MIP 37 232 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed7g0834 253 MobiDBLite consensus disorder prediction 1 20 - -
Aed7g0834 253 SUPERFAMILY Aquaporin-like 29 238 IPR023271 -
Aed7g0834 253 TIGRFAM MIP: MIP family channel proteins 41 240 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed7g0834 253 Gene3D Glycerol uptake facilitator protein. 22 248 IPR023271 -
Aed7g0834 253 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 7 242 IPR034294 -
Aed7g0834 253 ProSitePatterns MIP family signature. 103 111 IPR022357 -
Aed7g0834 253 PRINTS Major intrinsic protein family signature 171 189 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed7g0834 253 PRINTS Major intrinsic protein family signature 207 229 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed7g0834 253 PRINTS Major intrinsic protein family signature 85 109 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed7g0834 253 PRINTS Major intrinsic protein family signature 37 56 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed7g0834 253 PRINTS Major intrinsic protein family signature 122 141 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed7g0834 253 PANTHER AQUAPORIN PIP2-4-RELATED 7 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0834 Aed-Chr7 6355578 6359280 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0834 1 241 Major Intrinsic Protein MIP AT2G37170 83.884 4.02e-147 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0834 K09872 - gmx:547857 466.848