Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0833 ATGGCTAAGCACGATGTTGAGGGTGGTTCCTTCACTGCCAAGGACTACCATGACCCTCCTCCAGCACCTTTGATTGATGCTGAGGAACTCACTCAATGGTCCTTCTACAGGGCCTTGATTGCTGAGTTCATTGCCACACTGCTCTTCCTTTACATCACAGTGCTCACTGTGATTGGTTACAAGAGCCAGAGTGATCTCAATGCTGGGGGTGATGAGTGTGGTGGTGTTGGCATTCTTGGCATTGCTTGGGCCTTTGGTGGCATGATCTTCATCCTTGTTTACTGCACTGCTGGAATCTCAGGTGGTCACATAAACCCAGCAGTGACATTTGGGCTGTTCTTGGCTCGCAAGGTGTCTTTGATAAGAGCCATAATGTACATGGTGGCTCAGTGCTTGGGAGCCATATGTGGAGTTGGGTTGGTTAAGGCCTTCCAAAGTGCTCACTACAACAGGTATGGTGGTGGAGCCAATGAGCTGAGTGAAGGGTACAGCAAAGGTGTTGGATTGGGTGCTGAGATCATTGGAACCTTTGTTTTGGTTTACACTGTCTTCTCTGCAACTGACCCCAAGAGGAATGCTAGAGATTCTCATGTGCCGGTTTTGGCTCCACTTCCAATTGGATTTGCTGTGTTCATGGTTCACTTGGCAACCATCCCAGTCACTGGCACTGGTATTAACCCTGCTAGGAGTTTTGGAGCAGCTTGGATCTTTTGGGTTGGACCATTTATTGGAGCAGCTATTGCAGCTTTCTACCACCAATTCATCTTGAGAGCAAGTGCTGCTAAGGCTCTTGGATCATTCAGGAGCAACCCCACCACTATTTGA 825 0.4861 MAKHDVEGGSFTAKDYHDPPPAPLIDAEELTQWSFYRALIAEFIATLLFLYITVLTVIGYKSQSDLNAGGDECGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAIMYMVAQCLGAICGVGLVKAFQSAHYNRYGGGANELSEGYSKGVGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSFGAAWIFWVGPFIGAAIAAFYHQFILRASAAKALGSFRSNPTTI 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0833 274 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 7 270 IPR034294 -
Aed7g0833 274 TIGRFAM MIP: MIP family channel proteins 41 252 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed7g0833 274 Gene3D Glycerol uptake facilitator protein. 22 273 IPR023271 -
Aed7g0833 274 SUPERFAMILY Aquaporin-like 29 257 IPR023271 -
Aed7g0833 274 PANTHER AQUAPORIN PIP2-4-RELATED 7 270 - -
Aed7g0833 274 CDD MIP 37 255 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed7g0833 274 Pfam Major intrinsic protein 29 252 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed7g0833 274 ProSitePatterns MIP family signature. 103 111 IPR022357 -
Aed7g0833 274 PRINTS Major intrinsic protein family signature 37 56 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed7g0833 274 PRINTS Major intrinsic protein family signature 122 141 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed7g0833 274 PRINTS Major intrinsic protein family signature 85 109 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed7g0833 274 PRINTS Major intrinsic protein family signature 171 189 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed7g0833 274 PRINTS Major intrinsic protein family signature 207 229 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aed7g0833 274 PRINTS Major intrinsic protein family signature 235 255 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0833 Aed-Chr7 6351351 6354144 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0833 1 269 Major Intrinsic Protein MIP AT2G37170 81.915 2.47e-167 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0833 K09872 - gmx:100797014 526.168