Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0829 ATGATCGGAAACTTCATCGACGACATTGACTGCGGCAGTTTCTTCGATCACATCGACGACCTTCTCGAATTCCCCGAAGACGCCGCCACCGCCGCCGACACCACCGCCGCCGTGCCGGTCATTCCTCCGGCGAACTTCTGGTCCGCCGAGTCCGACTCGCTCCCCGCCGCTGACACGGTGTTTTCCGACAACTCCGTGACGGACCTCTCGGCGGAGCTCTCTGTTCCGTATGAAGACATTGTGCAATTGGAATGGCTGTCAAATTTTGTTGAGGACTCTTTCTCTGGTGGAAGCCTCACCATGAAGAAAGAGGAGGACCCACAACAACAATGCACCACCAAGGAGGACATAGCTCATGCCCAATTCCAGACATCAAGCCCAGTCTCAGTCCTTGAAAGCAGCAGTTTCTGCTCCGGTGAGAAGGCAGCTGCAGCACCACCACCTCGCAGCCCGGAGATTTACATCCCCGTGCCGTGTGGGCGCGCACGCAGCAAGCGCCCGCGCCCTGCAGCCTTCAACCCCCATCCAGTGATGCATCTCATCTCCCCTGCATCCTCCACCGCCGAGAACACACAGCACAACGCCACTGCCAAGGCCTCGTCAGATTCGGAGAATTTTGCCGAGTCAATGAACAAGCACAAGAAGAAAAAGAAGATCAAAGTGACATTCTCATCAGGCCAAGAGCAGCAGAATGCTGCAGCATCACAATCACAAGCAGTTAGGAAATGCTTGCACTGTGAGATAACCAAGACACCACAGTGGAGGGCAGGGCCAATGGGGCCAAAAACACTCTGCAATGCCTGTGGCGTGCGTTACAAGTCAGGCCGGCTTTACCCCGAATACCGCCCCGCGGCCAGCCCGACGTTCTGTGCCGCGATGCACTCAAACTCCCACAAGAAGGTCATTGAAATGAGGAACAAGGCATGCACCAAATCCGGCTTTGCAACTGATTCTGCTGCTGCTGCCTCACCACCAGAACTCATTCCAAACACTAACACCAGCCTTTCCCTTGAATACATGTGA 1023 0.5543 MIGNFIDDIDCGSFFDHIDDLLEFPEDAATAADTTAAVPVIPPANFWSAESDSLPAADTVFSDNSVTDLSAELSVPYEDIVQLEWLSNFVEDSFSGGSLTMKKEEDPQQQCTTKEDIAHAQFQTSSPVSVLESSSFCSGEKAAAAPPPRSPEIYIPVPCGRARSKRPRPAAFNPHPVMHLISPASSTAENTQHNATAKASSDSENFAESMNKHKKKKKIKVTFSSGQEQQNAAASQSQAVRKCLHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLYPEYRPAASPTFCAAMHSNSHKKVIEMRNKACTKSGFATDSAAAASPPELIPNTNTSLSLEYM 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0829 340 MobiDBLite consensus disorder prediction 187 224 - -
Aed7g0829 340 ProSitePatterns GATA-type zinc finger domain. 243 268 IPR000679 GO:0006355|GO:0043565
Aed7g0829 340 PANTHER GATA TRANSCRIPTION FACTOR 8 1 340 - -
Aed7g0829 340 CDD ZnF_GATA 242 289 IPR000679 GO:0006355|GO:0043565
Aed7g0829 340 PANTHER GATA TRANSCRIPTION FACTOR 1 340 - -
Aed7g0829 340 SMART GATA_3 237 287 IPR000679 GO:0006355|GO:0043565
Aed7g0829 340 PIRSF Txn_fac_GATA_plant 2 327 IPR016679 GO:0003677|GO:0005634|GO:0045893
Aed7g0829 340 ProSiteProfiles GATA-type zinc finger domain profile. 237 273 IPR000679 GO:0006355|GO:0043565
Aed7g0829 340 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 241 300 - -
Aed7g0829 340 Gene3D - 237 288 IPR013088 GO:0006355|GO:0008270
Aed7g0829 340 MobiDBLite consensus disorder prediction 187 206 - -
Aed7g0829 340 Pfam GATA zinc finger 243 276 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0829 Aed-Chr7 6328172 6333837 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0829 18 307 C2C2-Gata Transcription Factor Family AT4G32890 36.789 1.74e-47 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Aed7g0829 GATA 2.2e-14 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0829 - - gmx:100792644 525.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0829 7 6328172 6333837 Aed1g2494 1 20662387 20666444 PCT