Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0817 ATGGAGGATTCAGAGGAAGATGAGCTTCTGAATCTTACTCTTTCAGTTGATTCTGGTAGGGAGAGGAGGAAGAAAAACACTGATTCTGTTATTGTTCCTATGAAGAAGTCCAATAATGAAGGCTATGAAGGGAAGATCTTTAGGCTCCTCCAAATGAGGGAGCTGATGATAAGAAAAGGAGTAGTGGCTGAAGATCATGTGAACAACAACAACAATGGTCTTCCTTTGATTCACTTGCTTCTCTCAACAGCCACTGCTGTTGATGATGATGATGATGATGATGAAAGAAACCATTGTGCAGCACTTGAGAGTCTCATTGACTTGTACCAAACGGTTTCTCTAACCGGTGACTCGGTTCAGCGTGTTGTGGCCTATTTCGCTGATGGTTTGGCTGCAAGGCTTCTCACAAAGAAGTCACCATTCTATGACATGCTCATGGAGGAGCCAACAAGTGAGGAAGAGTTTCTTGCATTCACTGATCTCTATAGAGTCTCACCTTATTACCAATTTGCACACTTCACAGCAAACCAAGCCATTTTGGAGGCCTATGAGGAGGAGCAAAAGAACAACAACAACAACAAAGCACTTCATGTCATTGACTTTGATGTCTCCTATGGCTTCCAATGGCCTTCTCTTATTCAATCACTCTCTCAAAAGGCAACCAGTGGCAACAGAATCTCCCTCAGGATAACAGGTTTTGGGGATAATCTCAAGGAATTGCAAGAAACTGAGGCAAGGTTGGTTAGTTTCTCAAAGGGGTTTGGTAACCACCTTGTGTTTGAATTCCAAGGCTTGTTAAGAGGCTCATCATCAAGGGTAATTACCAACCTGACGAGGAGAAGAAAAAATGAAACTGTGGCAGTGAACCTTGTTTCTTATTTGAACACTAGTTTGAGTGGTTTCATGAAGGTGTCTGATTCTGACACTTTGGGATTTGTTCATTCTCTTAGCCCCTCCATTGTGGTGTTGGTGAAACAAGAAGGTAGCTGCAGCAGGAGTGTGAAGACCTTCTTGTCAAGGTTCACCGAGTCTTTGCACTATTTCGCAGCCATGTTTGATTCACTGGATGATTGCTTGCCACTTGAGAGCACTGAGAGATTGAGGATTGAGAAGAAGCTTCTGGGGAAAGAGATCAAAACCATGCTCAATTATGAGAGGATGGAAACATGGAAAGGGAGAATGGAGAATCATGGTTTTGTTGGAAGGAAAATAAGCTCAAAGTGTGTAATCCAAGCAAAGCTACTTCTGAAGATGAGGACTCATTATTATCCACTGCAAATTGAAGAAGAGGGTGGTGGGGGATTCAGAGTTTCTGAAAGGGATGAAGGGAGAGTTATCTCTTTGGGGTGGCAAAATAGCTTTCTTCTCACTGTCTCAGCATGGCAACCAGTTTGA 1395 0.4294 MEDSEEDELLNLTLSVDSGRERRKKNTDSVIVPMKKSNNEGYEGKIFRLLQMRELMIRKGVVAEDHVNNNNNGLPLIHLLLSTATAVDDDDDDDERNHCAALESLIDLYQTVSLTGDSVQRVVAYFADGLAARLLTKKSPFYDMLMEEPTSEEEFLAFTDLYRVSPYYQFAHFTANQAILEAYEEEQKNNNNNKALHVIDFDVSYGFQWPSLIQSLSQKATSGNRISLRITGFGDNLKELQETEARLVSFSKGFGNHLVFEFQGLLRGSSSRVITNLTRRRKNETVAVNLVSYLNTSLSGFMKVSDSDTLGFVHSLSPSIVVLVKQEGSCSRSVKTFLSRFTESLHYFAAMFDSLDDCLPLESTERLRIEKKLLGKEIKTMLNYERMETWKGRMENHGFVGRKISSKCVIQAKLLLKMRTHYYPLQIEEEGGGGFRVSERDEGRVISLGWQNSFLLTVSAWQPV 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0817 464 Pfam GRAS domain family 76 462 IPR005202 -
Aed7g0817 464 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 8 462 IPR005202 -
Aed7g0817 464 PANTHER OSJNBA0084A10.13 PROTEIN 8 462 - -
Aed7g0817 464 ProSiteProfiles GRAS family profile. 67 462 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0817 Aed-Chr7 6251192 6252586 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0817 105 463 GRAS Transcription Factor Family AT3G54220 35.200 3.85e-54 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aed7g0817 GRAS 3.9e-84 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0817 - - gmx:100778791 744.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0817 7 6251192 6252586 Aed1g2449 1 20318940 20320352 PCT