Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0807 ATGGAGAGAGAGTTGTGGGGTTCTGTTTTCATCTGGTGGCTGCTATTAGCTCACCCATTATTATGGTTGGTTTCTGCTAACATGGAAGGTGATGCCTTACATAGCCTGAGGACAAATTTACAGGATCCTAACAATGTTTTGCAAAGTTGGGACCCTACACTGGTCAATCCATGCACGTGGTTTCATGTGACATGCAACAATGATAATAGTGTCATAAGAGTTGATCTGGGAAATGCTGCTTTGTCTGGTCAACTTGTTCCACAGCTTGGCCAGCTCAAAAACTTACAGTATTTGGAACTTTACAGCAATAACATTAGTGGACCAATTCCAAATGATATTGGGAATCTTACTAACTTGGTGAGCTTGGATCTGTATCTAAACCGTTTCAGTGGACCTATCCCAGAGTCATTGGGCAAGTTGTCAAAATTGCGTTTCCTCCGGCTTAACAACAACAGCCTGACTGGTCCTATTCCCATGTCACTGACTAATATTACAGCTCTCCAAGTGCTGGATTTGTCTAACAACCAGCTATCAGGTGTGGTTCCCGATAATGGCTCCTTCTCATTATTCACTCCTATCAGTTTTAACAACAACTTGGATCTATGTGGCCCAGTCACTGGGCGTCCTTGTCCTGGGTCTCCTCCATTTTCTCCTCCTCCCCCATTTGTCCCAACATCCCCAATCTCAGCTCCAGAAGGAAATAGTGCCACTGGTACAATAGCTGGAGGAGTAGCTGCAGGTGCTGCTCTGTTATTTGCTGCACCTGCAATTGTGTTTGCATGGTGGCGTCGAAGGAAGCCACAAGAATTTTTCTTTGATGTGCCTGCTGAAGAGGATCCTGAAGTACACCTTGGGCAGCTTAAGAGGTTCTCACTACGAGAACTGCAAGTTGCAACAGATACTTTCAGCAATAAGAACATTCTTGGAAGGGGAGGATTTGGTAAGGTCTACAAAGGACGTTTGACAGATGGTTCACTGGTTGCTGTGAAAAGATTGAAAGAGGAGCGCACACCTGGTGGGGAGCTTCAGTTTCAGACTGAAGTAGAGATGATCAGCATGGCTGTGCACCGAAATCTCCTCCGTTTACATGGGTTCTGTATGACTCCAACCGAAAGGCTACTTGTATATCCTTACATGGCTAATGGAAGTGTTGCCTCATGCTTAAGAGGTACCACCTTTGCTTTTTCCTCCTATAGTCTATGGCCATTTGACCATGTAACATTCTATGCTACTGTAAAAGGACTTCTGAAAGAAAAGAAGCTAGAAATGTTGGTTGATCCTGATCTCCATAGCAATTACATAGATGCTGAGGTAGAACAGTTAATCCAGGTTGCACTGCTTTGCACACAAGGTTCCCCTATGGACCGGCCTAAGATGTCAGAAGTGGTGCAGATGCTTGAAGGTGACGGCTTGGCAGAAAGATGGGATGAGTGGCAAAAGGTGGAAGTTCTGCGCCAGGAAGTGGAGCTTGCCCCTCATCCAAATTCTGATTGGATTGTTGACTCAACTGAAAATCTACATGCAGTTGAGTTATCTGGACCAAGGTGA 1548 0.4509 MERELWGSVFIWWLLLAHPLLWLVSANMEGDALHSLRTNLQDPNNVLQSWDPTLVNPCTWFHVTCNNDNSVIRVDLGNAALSGQLVPQLGQLKNLQYLELYSNNISGPIPNDIGNLTNLVSLDLYLNRFSGPIPESLGKLSKLRFLRLNNNSLTGPIPMSLTNITALQVLDLSNNQLSGVVPDNGSFSLFTPISFNNNLDLCGPVTGRPCPGSPPFSPPPPFVPTSPISAPEGNSATGTIAGGVAAGAALLFAAPAIVFAWWRRRKPQEFFFDVPAEEDPEVHLGQLKRFSLRELQVATDTFSNKNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLHGFCMTPTERLLVYPYMANGSVASCLRGTTFAFSSYSLWPFDHVTFYATVKGLLKEKKLEMLVDPDLHSNYIDAEVEQLIQVALLCTQGSPMDRPKMSEVVQMLEGDGLAERWDEWQKVEVLRQEVELAPHPNSDWIVDSTENLHAVELSGPR 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0807 515 Pfam Leucine Rich Repeat 94 116 IPR001611 GO:0005515
Aed7g0807 515 Pfam Protein tyrosine and serine/threonine kinase 305 391 IPR001245 GO:0004672|GO:0006468
Aed7g0807 515 PANTHER LEUCINE-RICH REPEAT DOMAIN, L DOMAIN-LIKE PROTEIN-RELATED 401 515 IPR031048 GO:0004675|GO:0005102|GO:0006468
Aed7g0807 515 PANTHER LEUCINE-RICH REPEAT DOMAIN, L DOMAIN-LIKE PROTEIN-RELATED 14 390 IPR031048 GO:0004675|GO:0005102|GO:0006468
Aed7g0807 515 SUPERFAMILY Protein kinase-like (PK-like) 406 475 IPR011009 -
Aed7g0807 515 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 14 390 - -
Aed7g0807 515 SUPERFAMILY Protein kinase-like (PK-like) 280 399 IPR011009 -
Aed7g0807 515 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Aed7g0807 515 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 401 515 - -
Aed7g0807 515 SUPERFAMILY L domain-like 30 193 - -
Aed7g0807 515 ProSiteProfiles Protein kinase domain profile. 302 515 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed7g0807 515 Gene3D Phosphorylase Kinase; domain 1 271 378 - -
Aed7g0807 515 Gene3D Ribonuclease Inhibitor 25 212 IPR032675 -
Aed7g0807 515 Gene3D Transferase(Phosphotransferase) domain 1 391 486 - -
Aed7g0807 515 ProSitePatterns Protein kinases ATP-binding region signature. 308 330 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0807 Aed-Chr7 6125286 6131918 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0807 394 515 Receptor kinase-like Gene Family AT1G71830 74.590 1.90e-53 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Aed7g0807 PK_Tyr_Ser-Thr 9.7e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0807 K13418 - gmx:100813918 697.967