Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0785 ATGCTGCTTTTAAAAGCCCCACTCTGTTATCTCAACCTAAACCTCCCAAACCCCCCACCATCCATGGCGGGAGCTACAGGAAGAACCCTCTTCACCCTCTCCCTCTCTTCCTCCTCTTCCCTCACGCGCTTCTCTCGCTTCACTAGGCGCGTCCCACTCCCCAGACCCCTCCCTCTCTTCCGCCCCCTCTGCTCCGTCGCTGCCGCCGCGCCGGAAACCGCCGACGCGAAGCACTCGCTTCTCCTCGACAGGCTCCGCTCCCGACACCTCCGGGATGCTACGAGAGCCGCCCCCGAACCGAGAAAGAAGGCGAAAAATGCCGCCGCCGCCGCCGCCGCCGCGGAGGCCGAAAAAGAGAAGAAGAAAGCGGTTGAGAGCTTCGAGGAGCTTGGAGTGAGCGAGGAGGTCATGGGAGCGGTTAGGGAAATTGGAATTGAAGTTCCTACTGAAATACAGGGCATTGGCATCCCCGCCGTTTTGGAAGAGAAGAGTGTTGTTTTGGGGTCGCACACTGGCTCTGGCAAAACCCTCGCTTACTTGCTTCCCCTTGCTCAGCTGCTAAGACGGGACGAACAATTGAATGGAATACTGTTGAAGCCTAGGCGTCCGCGAGCTGTTGTGTTGTGTCCTACAAGGGAGTTATCTGAGCAGGTTTTTCGAGTTGCAAAATTGATAAGCCATCATGCACGATTCAGGTGTACCATGGTAAGTGGTGGTGGCCGGCTTAGGCCTCAGGAGGATTCGCTTAATAACCCCATTGATATGGTAGTTGGTACCCCTGGCAGGGTTCTTCAACATATTGAGGAGGGAAATATGGTATATGGTGACATCAGATACTTGGTATTGGATGAGGCAGATACAATGTTTGATCGGGGCTTTGGTCCTGATATACGCAAATTTCTGGGTCCATTAAAAAATCGTGCTTTAAAATCTGATGGTCTGGGTTTTCAGACTATATTGGTAACTGCAACCATGACAAAGGCTGTGCAAATGCTGATTGATGAGGAGTTTCAAGGCATTGTTCATTTGCGCACGTCAACATTGCATAAAAAGATTTCCTCTGCTCGTCATGATTTTATGAAACTTTCAGGTTCTGAGAACAAGCTTGAAGCATTACTTCAGGTACTAGAGCCAAGCCTAGCAAAAGGGAACAAGGTGATGGTTTTCTGTAATACATTGGATTCAAGTCGTGCCGTGGATCATTTTCTTGGTGAAAATCAGGTTTCTACTGTGAACTACCATGGGGAGGTACCAGCAGAGCAAAGGGTTGAAAATCTCAGAAAGTTTAAGAGTGATGGTGATGATTGTCCTACATTGGTTTGCACAGACTTGGCTGCTAGGGGTCTAGACATGGATGTAGATCATGTTGTCATGTTTGACTTCCCCTTGAACTCTATTGACTACCTTCATCGCACAGGTAGAACTGCTCGTATGGGTGCAAAAGGGAAGGTAACAAGTTTAGTTGCTAAAAAGGACATGGACTTGGCCAGCAAAATAGAGGAAGCATTAAGGAAGAATGAGAGTTTGGAGGCTATAACTAAAGAAAGTGTCCGAAGGGACATTGCAAGGACCCAAAATCATATCTCTGAGCAGAAGGGAGAGAGTAAAAGATTGGTTAAAGTTTCAAAAGTAAAGGGAAAATTTGGTAGTCGTGCCAGTTCTGGGAAGAATAATGGGTCAGCTGGTATGAAATCTGGTAAAGGGTCACCCGTCAAATCTATGAAGAAAGGGATTAACGTTTCAAAATCTGAAAAATCTACTAGTCCAAGCACCTTCAGAAAAGCTTCTTCAGAGAAGAAAAAAACAAGTAAAATGGTCAGTGCCACCAAATCTACGAATTCTAAACTCAATGTTGTGGGGTTTAGGGGGAAAAATTCTTCATCAAATAATAACGAATCGGTTTTGTGA 1908 0.4712 MLLLKAPLCYLNLNLPNPPPSMAGATGRTLFTLSLSSSSSLTRFSRFTRRVPLPRPLPLFRPLCSVAAAAPETADAKHSLLLDRLRSRHLRDATRAAPEPRKKAKNAAAAAAAAEAEKEKKKAVESFEELGVSEEVMGAVREIGIEVPTEIQGIGIPAVLEEKSVVLGSHTGSGKTLAYLLPLAQLLRRDEQLNGILLKPRRPRAVVLCPTRELSEQVFRVAKLISHHARFRCTMVSGGGRLRPQEDSLNNPIDMVVGTPGRVLQHIEEGNMVYGDIRYLVLDEADTMFDRGFGPDIRKFLGPLKNRALKSDGLGFQTILVTATMTKAVQMLIDEEFQGIVHLRTSTLHKKISSARHDFMKLSGSENKLEALLQVLEPSLAKGNKVMVFCNTLDSSRAVDHFLGENQVSTVNYHGEVPAEQRVENLRKFKSDGDDCPTLVCTDLAARGLDMDVDHVVMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKKDMDLASKIEEALRKNESLEAITKESVRRDIARTQNHISEQKGESKRLVKVSKVKGKFGSRASSGKNNGSAGMKSGKGSPVKSMKKGINVSKSEKSTSPSTFRKASSEKKKTSKMVSATKSTNSKLNVVGFRGKNSSSNNNESVL 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0785 635 MobiDBLite consensus disorder prediction 524 541 - -
Aed7g0785 635 Pfam DEAD/DEAH box helicase 149 331 IPR011545 GO:0003676|GO:0005524
Aed7g0785 635 Pfam Helicase conserved C-terminal domain 368 479 IPR001650 -
Aed7g0785 635 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 39 57 553 - -
Aed7g0785 635 SMART ultradead3 144 353 IPR014001 -
Aed7g0785 635 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 490 IPR027417 -
Aed7g0785 635 MobiDBLite consensus disorder prediction 92 113 - -
Aed7g0785 635 MobiDBLite consensus disorder prediction 524 635 - -
Aed7g0785 635 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 57 553 - -
Aed7g0785 635 Gene3D - 88 344 IPR027417 -
Aed7g0785 635 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 125 153 IPR014014 GO:0003724
Aed7g0785 635 SMART helicmild6 397 479 IPR001650 -
Aed7g0785 635 MobiDBLite consensus disorder prediction 606 635 - -
Aed7g0785 635 Gene3D - 354 618 IPR027417 -
Aed7g0785 635 CDD SF2_C_DEAD 356 488 - -
Aed7g0785 635 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 156 343 IPR014001 -
Aed7g0785 635 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 368 521 IPR001650 -
Aed7g0785 635 CDD DEADc 136 335 - -
Aed7g0785 635 Coils Coil 104 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0785 Aed-Chr7 5945317 5949808 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0785 124 501 Eukaryotic Initiation Factors Gene Family AT3G19760 27.720 3.48e-40 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0785 - - gmx:100805709 985.711