Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0740 ATGTCCTTAACGGTGGCGCACCAAAGGGGGTCAGGTGAGTTTTTCCGGTTCACGGAAAATCATGACGACGGTGACAGCAACTACGGCGGTGATGGTGAATATAGCTATGGACATGATGATGGTAGTGAAGGTGGCGTTGGTTCATTAGGGTTGAATTTTAACCAAGTGATGCAACAAGGCGAGGTCACATTGCAAGGTGGTTCTTTGGCTTCAGGGTACAGCAGGGGTGAGCCAGAGTTGAGAGAAATGGTTTCAGCTTTGACACACGTGGTTTCATCAGGGTCTAGCCAGAGTAGCACTGAATGGATCCACCAAAGTGGTTTTCCTATGATGTCTGGTCTTGGACATGCATCTTCTCTTTCACGTTTGTCTTCTTTTTCTTCTTCTCCTTCTCCTTCTCCTGGTCCCTCTTGGGTTGGCCACAAAAGAGGCAGAGAAGAAGAAGAGAGTAGCTCTTCACATAACTTGATGCAACAACAACAACAAAGAGCTCCAAGACTCTTCAGAAACATTGGTGACTTCATGTCTCCTTCTCAAGGAGATTCATCATCAGTGACAGAAGAAGCCCCCACCTCCACAACTACCAGTGTAACCACCGCAGCCGCAGTTGCGGCCACAGCGGTTACTGATGCCCCACCTGGGGAAAGGAGGAGAAAGTACAGGGGAGTGAGGCAGAGGCCGTGGGGGAAATGGGCAGCTGAAATCCGTGATCCACACAAAGCAGCAAGAGTGTGGCTTGGGACATTTGACACAGAAGAAGCAGCAGCAAGAGCTTATGATGAAGCTGCATTGAGGTTCAGAGGCAACAGAGCAAAGCTAAACTTCCCTGAGAATGTAAGAGCAGTTCCACCCATTCAACCTTTTCAATCCACCACTAGGCTAACCGCTTCTGATTCCACCACCTCTCAATACCAGCCACTCACCGCAACGGCTCCGAGCTTCACTCAACAGCCACAGATTCAGGGCTCCTCTGACTTTATCAGAGACTATTTGCAATACTCTCAGCTTCTACAGAGTGATTTCCAACAGCAACAACAACAACAACAACAACAAAATTCTAGTTTGCTTCAACAATTGTACTTTAATGCACACTTGGCTTCACTTCAATCACCTTCATTTTCTTCTTCTGTGTCACCAACACCATTCCCATTATTCTCAACCTCTGCTCAGCTTTCCTCTGCTTCTTTCCCCCTGTTTTCAAGTCAACAAATAGGCTATTTCCCGCCACCGGAAACCCGCCCTCCCCCCACCGGCATGCCGGAGTTTCCTCCGTCAACATGGTCCGATACCAGTGGCCAGCCACCACCTTCTGCTTAA 1317 0.4867 MSLTVAHQRGSGEFFRFTENHDDGDSNYGGDGEYSYGHDDGSEGGVGSLGLNFNQVMQQGEVTLQGGSLASGYSRGEPELREMVSALTHVVSSGSSQSSTEWIHQSGFPMMSGLGHASSLSRLSSFSSSPSPSPGPSWVGHKRGREEEESSSSHNLMQQQQQRAPRLFRNIGDFMSPSQGDSSSVTEEAPTSTTTSVTTAAAVAATAVTDAPPGERRRKYRGVRQRPWGKWAAEIRDPHKAARVWLGTFDTEEAAARAYDEAALRFRGNRAKLNFPENVRAVPPIQPFQSTTRLTASDSTTSQYQPLTATAPSFTQQPQIQGSSDFIRDYLQYSQLLQSDFQQQQQQQQQQNSSLLQQLYFNAHLASLQSPSFSSSVSPTPFPLFSTSAQLSSASFPLFSSQQIGYFPPPETRPPPTGMPEFPPSTWSDTSGQPPPSA 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0740 438 MobiDBLite consensus disorder prediction 175 203 - -
Aed7g0740 438 Gene3D AP2/ERF domain 218 278 IPR036955 GO:0003700|GO:0006355
Aed7g0740 438 MobiDBLite consensus disorder prediction 423 438 - -
Aed7g0740 438 MobiDBLite consensus disorder prediction 120 223 - -
Aed7g0740 438 MobiDBLite consensus disorder prediction 402 438 - -
Aed7g0740 438 Pfam AP2 domain 219 268 IPR001471 GO:0003700|GO:0006355
Aed7g0740 438 ProSiteProfiles AP2/ERF domain profile. 219 276 IPR001471 GO:0003700|GO:0006355
Aed7g0740 438 MobiDBLite consensus disorder prediction 120 135 - -
Aed7g0740 438 SUPERFAMILY DNA-binding domain 219 277 IPR016177 GO:0003677
Aed7g0740 438 CDD AP2 219 278 IPR001471 GO:0003700|GO:0006355
Aed7g0740 438 PANTHER DNA-BINDING DOMAIN 77 403 IPR044808 GO:0003700|GO:0009873
Aed7g0740 438 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF110 77 403 - -
Aed7g0740 438 MobiDBLite consensus disorder prediction 408 422 - -
Aed7g0740 438 SMART rav1_2 219 282 IPR001471 GO:0003700|GO:0006355
Aed7g0740 438 PRINTS Ethylene responsive element binding protein signature 220 231 IPR001471 GO:0003700|GO:0006355
Aed7g0740 438 PRINTS Ethylene responsive element binding protein signature 242 258 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0740 Aed-Chr7 5621730 5624414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0740 216 283 AP2-EREBP Transcription Factor Family AT2G33710 77.941 6.47e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aed7g0740 AP2 3.3e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0740 - - gmx:100804843 535.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0740 7 5621730 5624414 Aed1g2366 1 19722991 19723962 PCT