Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0734 ATGGCTGCTTCAACAATGGCTCTCTCTTCATCATCATTGGCTGGCCAAGCCATCAAGCTTTCCCCCTCAACCCCTGATCTTGGGGTTGGAAGGGTTAGCATGAGGAAAACTTCCCCCAAGACTTCCTCAGGAAGCCCATGGTACGGCCCAGACCGTGTCAAGTACTTGGGCCCACTCTCCGGTGAGGCTCCATCCTACCTCACTGGTGAATTCCCAGGTGACTATGGTTGGGACACTGCTGGGCTTTCTGCTGACCCAGAGACTTTTGCCAAAAACCGTGAACTCGAAGTCATCCACTCCAGATGGGCCATGTTGGGAGCCTTGGGCATTGTTTTCCCCGAACTCTTGTCCCGCAACGGTGTCAAGTTTGGTGAGGCCGTGTGGTTTAAGGCTGGGTCTCAAATATTCAGTGAAGGTGGGCTTGACTACTTGGGTAACCCAAGCCTGGTCCATGCACAAAGCATCCTTGCCATCTGGGCCTCCCAAGTTGTCTTGATGGGTGCCGTTGAGGGTTACCGTATTGCCGGTGGGCCTCTCGGTGAGGTGACTGACCCAATCTACCCAGGTGGAAGCTTTGACCCATTGGGCCTTGCTGACGACCCAGAGGCTTTCGCCGAGTTGAAGGTTAAAGAGCTCAAGAATGGTAGGTTAGCTATGTTCTCTGTTTTCGGATTCTTTGTTCAAGCCATTGTGACTGGAAAGGGACCTTTGGAGAACCTTGCTGATCACCTTGCTGACCCAGTGAACAACAATGCCTGGGCCTATGCCACAAACTTTGTCCCCGGAAACCCATGGTACGGCCCAGACCGTGTTAAGTACTTGGGCCCATTGTCGGGTGAGTCCCCATCCTACCTCACTGGTGAATTCCCCGGTGACTATGGTTGGGACACTGCCGGACTTTCTGCTGATCCAGAGACTTTTGCCAAAAACCGTGAACTCGAAGTCATCCACTCCAGATGGGCCATGTTGGGAGCCTTGGGCATTGTTTTCCCCGAACTCTTGTCCCGCAACGGTGTCAAGTTTGGTGAGGCCGTGTGGTTTAAGGCTGGGTCTCAAATATTCAGTGAAGGTGGGCTTGACTACTTGGGCAACCCAAGCCTAGTCCATGCACAAAGCATCCTTGCCATATGGGCCTCCCAAGTTATCTTGATGGGTGCCGTTGAGGGTTACCGTATTGCCGGTGGGCCTCTCGGTGAGGTGACTGACCCAATCTACCCAGGTGGCAGCTTCGACCCACTGGGCCTTGCTGAAGACCCAGAGGCTTTCGCTGAGTTGAAGGTGAAAGAACTCAAGAATGGTAGGTTGGCTATGTTCTCCGTGTTTGGTTTCTTTGTTCAAGCCATTGTGACCGGAAAAGGACCTTTGGAGAACCTTGCTGATCACCTGGCTGACCCAGTGAACAACAACGCCTGGGCTTATGCCACAAACTTTGTTCCCGGAAAGTGA 1446 0.5311 MAASTMALSSSSLAGQAIKLSPSTPDLGVGRVSMRKTSPKTSSGSPWYGPDRVKYLGPLSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGIVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSVFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGNPWYGPDRVKYLGPLSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGIVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAMFSVFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0734 481 SUPERFAMILY Chlorophyll a-b binding protein 264 478 - -
Aed7g0734 481 Pfam Chlorophyll A-B binding protein 63 229 IPR022796 -
Aed7g0734 481 Pfam Chlorophyll A-B binding protein 282 447 IPR022796 -
Aed7g0734 481 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 2, CHLOROPLASTIC 262 481 - -
Aed7g0734 481 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 2, CHLOROPLASTIC 1 262 - -
Aed7g0734 481 Gene3D Chlorophyll a/b binding protein domain 54 256 - -
Aed7g0734 481 Gene3D Chlorophyll a/b binding protein domain 272 474 - -
Aed7g0734 481 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 262 IPR001344 GO:0009765|GO:0016020
Aed7g0734 481 SUPERFAMILY Chlorophyll a-b binding protein 46 260 - -
Aed7g0734 481 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 262 481 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0734 Aed-Chr7 5552180 5555966 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0734 262 481 Chloroplast and Mitochondria Gene Families AT1G29930 91.855 1.16e-146 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0734 K08912 - gmx:100800351 508.834