Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0716 ATGCAGCTAGGAGGCTCATCAAGTGTGTTGGAGATCTCCTCCCATACTGAGCCCGAGATGGCGGTGACGGCAGTGGTGCCGTCGGAAGAAGCAGCACATGACGATAACAGTGACAACGACAACGGTGGTGGTGATGAGATGATGACCGGGATGGACATGGATGCGAATTCAGGTGAAGGAAATGAAGCTAATAAGATGAACTTTGGAGGGAACCGGTGGCCCCGCCAAGAAACTTTGGCTCTCTTGAAGATAAGGTCGGATATGGATGCAGTTTTTCGAGATTCAAGTCTTAAAGGTCCACTTTGGGAAGAAGTTTCAAGGAAACTGGGAGGGCTTGGATATGAACGAAGCGCAAAGAAGTGCAAGGAAAAGTTTGAGAATGTGTACAAGTACAACAAGAGAACCAAAGAGAACAAAAGTGGCAAATCGCATGGAAAAACCTATAAATTCTTTGATCAATTACAAGCCCTCGAGAACCAATTCCCAATCTCTCACCCGCCAAGACCACAACCTACTACAACAACAACAACAAACACGTTGACATTGCCAACAAGACCAAATGTTCATCATGGTAACAACCAAGTTATTTCTTATGTCACACCTTTTCCTTCCACAAACCCTACTCTCATTTCACCTCCTCCACAAACCAACAACAACAATAATGTTCCACATTCTTTGCCAAACATGAACGCCACTCCATTCTCAACCACCACAACCTCCACCTCATCCTCCACAGCATCCGATGAGGACTTAGAAGAGAGATACAGAAGGAAGAGAAAATGGAAGGACTACTTCAAAAGACTCACTAGGAAGGTCCTCATGAAGCAAGAGGAAATGCAAAAGAAGTTCTTAGAAGCCATGGACCAAAGAGAGAGAGAAAGGGTTGCACAACAAGACAATTGGAGGATGCAAGAAATGTCAAGAATCAATAGAGAACATGAAATTCTCGTTCAAGAGAGATCATCAGCTGCAGCCAAAGATGCTGCAGTCATTGCATTATTGCAAAAAATGTATGGCGATCACCAAAACCCCACACAACAAGTTGAAGTAGAGCCACCACAACTACAACAAAAACAAACAATGCCTCGATCGCAACCTCCTTTATCAATGCCAAACAATAAGAAAATGAATAATAGTCACAGTGTTACTACTACTTCTCCGATGAGTTCTTCTTATTCTTCGCGGTGGCCAAAGGCTGAGGTTCATGCATTGATAAGGATAAGGACGGGTCTTGAAACAAAGTATCTAGAGAATGGACCAAAAGCTCCGTTGTGGGAAGATATATCAATTGCAATGCAGAGGCTTGGTTACAACCGTAGTGCGAAGAGGTGCAAGGAGAAGTGGGAGAACATAAACAAGTATTTCAAGAAAGTGAGGGAAGGAAACAAAGAGAGGCGTGAAGATAGCAAGACATGTCCATATTTCCACGAGCTTGAAGCTCTATACAAAGAAAAGAGCAAATTTGGCATGTTAACATTCCAGAACCTGAAGCCGAATGAGATGATGATGATGGAGCCGTTGATGGTGCAACCGGAGCAACAATGGAGACCTCCACCTCATGAATCATTGTTGGAAGAGGGTATAGGGAAGGAGAATAATGCAAGTGAAGAGTATCATCAAGAAAAAGAAGAAGAAAATGGTGATGATGATAACAACATTGATCAGGAAGAAGATGGAGATAGTGTGGAAGATGATGAAGGAGCAAACACGTGCGAGATTGCGACAAATAATTAA 1734 0.4314 MQLGGSSSVLEISSHTEPEMAVTAVVPSEEAAHDDNSDNDNGGGDEMMTGMDMDANSGEGNEANKMNFGGNRWPRQETLALLKIRSDMDAVFRDSSLKGPLWEEVSRKLGGLGYERSAKKCKEKFENVYKYNKRTKENKSGKSHGKTYKFFDQLQALENQFPISHPPRPQPTTTTTTNTLTLPTRPNVHHGNNQVISYVTPFPSTNPTLISPPPQTNNNNNVPHSLPNMNATPFSTTTTSTSSSTASDEDLEERYRRKRKWKDYFKRLTRKVLMKQEEMQKKFLEAMDQRERERVAQQDNWRMQEMSRINREHEILVQERSSAAAKDAAVIALLQKMYGDHQNPTQQVEVEPPQLQQKQTMPRSQPPLSMPNNKKMNNSHSVTTTSPMSSSYSSRWPKAEVHALIRIRTGLETKYLENGPKAPLWEDISIAMQRLGYNRSAKRCKEKWENINKYFKKVREGNKERREDSKTCPYFHELEALYKEKSKFGMLTFQNLKPNEMMMMEPLMVQPEQQWRPPPHESLLEEGIGKENNASEEYHQEKEEENGDDDNNIDQEEDGDSVEDDEGANTCEIATNN 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0716 577 ProSiteProfiles Myb-like domain profile. 65 129 IPR001005 -
Aed7g0716 577 ProSiteProfiles Myb-like domain profile. 394 452 IPR001005 -
Aed7g0716 577 PANTHER - 5 573 - -
Aed7g0716 577 MobiDBLite consensus disorder prediction 206 246 - -
Aed7g0716 577 MobiDBLite consensus disorder prediction 161 191 - -
Aed7g0716 577 SMART sant 69 131 IPR001005 -
Aed7g0716 577 SMART sant 392 454 IPR001005 -
Aed7g0716 577 MobiDBLite consensus disorder prediction 206 251 - -
Aed7g0716 577 MobiDBLite consensus disorder prediction 170 191 - -
Aed7g0716 577 MobiDBLite consensus disorder prediction 523 541 - -
Aed7g0716 577 CDD GT1 395 459 - -
Aed7g0716 577 MobiDBLite consensus disorder prediction 542 567 - -
Aed7g0716 577 CDD GT1 71 136 - -
Aed7g0716 577 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-2 5 573 - -
Aed7g0716 577 MobiDBLite consensus disorder prediction 1 71 - -
Aed7g0716 577 MobiDBLite consensus disorder prediction 513 577 - -
Aed7g0716 577 MobiDBLite consensus disorder prediction 343 393 - -
Aed7g0716 577 Pfam Myb/SANT-like DNA-binding domain 394 481 IPR044822 -
Aed7g0716 577 Pfam Myb/SANT-like DNA-binding domain 71 157 IPR044822 -
Aed7g0716 577 Gene3D - 396 457 - -
Aed7g0716 577 Gene3D - 73 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0716 Aed-Chr7 5355027 5357968 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0716 62 515 Trihelix Transcription Factor Family AT1G76880 49.697 3.94e-136 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Aed7g0716 Myb_DNA-bind_4 2.6e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0716 - - gmx:100807507 813.913
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0716 7 5355027 5357968 Aed1g2350 1 19544001 19546765 PCT