Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0715 ATGCTGGGGGACTCAGCAGTGTTGGGAACAGGAGGAGGAGGAGCCTCTGGTGATGATGCAGTGGCAGCACCACCTGCTGCTGCATCAGGAGGAGCTCATGACGGCGGTGGTGGTGTCAACGGTGGCGGATCAAATTCAGGGGAAGATAGAGTTGAGGAGGGTGACAAGAGCTTTGGTGGGAACAGGTGGCCGAGGCAAGAGACTCTAGCTTTGTTGAAAATACGCTCGGATATGGACGTGGCTTTTAGAGATGCAACTGTTAAGGGTCCCTTGTGGGAAGAGGTTTCTAGAAAACTGGCAGAGCATGGCTACCACAGAAATGCCAAGAAGTGCAAAGAGAAATTCGAGAACGTTTACAAGTACCACAAGAGAACCAAAGAAGGTCGTAGTGGGAAATCAGAAGGCAAAACTTATCGCTTCTTTGATCAATTACAAGCCCTTGAAAACCACCCTTCAATTCATGCTATAAGTATCCAATCTCCAACACCAACACTTTCAAAGCCACCACCACCATTACCATTACCAGCAACACCTGTGTCAATAGTGGTAACAACTACTACTATTCCTACTACTACACCATCATCAACAATGCCACTTCCTCAAACCACAACAGTTCCTAATAACACCACCACTGTTCCATCCACAACTACTACACTCCCTTTGCCTCAAGCCAGCATTCTCAACATAACACCACCTTCAACATACTTTCCTACACAAACACCAAACCCTACTACCACCACCACCAACAACATTATCACCCCGCCTTCCTTCCCAAACTTCCCGACCGATCTCTTGTCGAATTCGAGTTCTTCGTCGACATCCTCGGAGGAAACAACGACGATGGAGGGAGGCGGAGCAATGAGGCGCAACAAGAGGAAGAGGAAGTGGAAGGACTTCTTTGAGAGGCTGATGAAGGAGGTGATAGAGAAGCAGGAGGAGCTGCAAAGGAGGTTCCTGGAGGCCATAGAGAAGAGAGAGCAAGAGCGTGTGGTGAGGGAAGAAGCGTGGAGAATGCAAGAGATGCAAAGGATCAACAGGGAAAGAGAGATTCTAGCACAAGAGAGGTCCATTGCTGCTGCAAAAGATGCTGCTGTTATGGCATTTTTGCAAAAGATAGCCGAACATCAGCAACAAGAAATCAACCTTGACCCAGCATTGAACAATGTTAACAGCATCACTGTTGCTCCAACACCAACACCACAACAAACACAAATAACAGCAACAGTTCCTGAGGCCCCACAACAAGTTCAGGCTTTGGTCCCACAACCACAACCACAGCCACAGCAGCAGCAGCAACAACAAATAGTGGTGAGTAGTGTTGTGGAAATCAATAAAGCTGATAATAATAACGGTGAGAATTTGATGATGGGAGGAGCGAGCTCTTCAAGGTGGCCAAAAGTGGAAGTACAAGCACTGATAAACCTGAGGACAAACCTGGAAACAAAGTACCAGGAGAATGGACCAAAAGGGCCATTGTGGGAGGAGATCTCAGCGTTGATGAGGAAAATGGGGTACAACCGGAATGCCAAAAGGTGCAAAGAGAAGTGGGAGAACATCAACAAGTACTTCAAGAAAGTCAAGGAAAGCAACAAGAAGAGGCCTCAAGATTCCAAGACTTGTCCCTATTTTCACCAGCTGGAGGCTCTATACAAGGAGAAGAACAAGGGGGAGGGGCAATTGATGAAGCCGGAGAGCATGATGGCGCCACTCATGGTGCAGCCTGAGCAGCAATGGCCTCCTCAGACCCACGTGGTGCCGCCAGAAGTGACCATGGAAGACGCCCAGGATGACCCCATGGACCAGCTGCACCACGAGGACGATGAGGAGGAAGAGGATGACAAGGATATCGGAGATGAAGACGAGGACGAAGACTATGAAGGAGGCGGTAATTATGAGATTGTAGCAAGCAAACCAGCCTCAGCTGAAGCTGCTACTACCGGTGGAGAGTGA 1950 0.4872 MLGDSAVLGTGGGGASGDDAVAAPPAAASGGAHDGGGGVNGGGSNSGEDRVEEGDKSFGGNRWPRQETLALLKIRSDMDVAFRDATVKGPLWEEVSRKLAEHGYHRNAKKCKEKFENVYKYHKRTKEGRSGKSEGKTYRFFDQLQALENHPSIHAISIQSPTPTLSKPPPPLPLPATPVSIVVTTTTIPTTTPSSTMPLPQTTTVPNNTTTVPSTTTTLPLPQASILNITPPSTYFPTQTPNPTTTTTNNIITPPSFPNFPTDLLSNSSSSSTSSEETTTMEGGGAMRRNKRKRKWKDFFERLMKEVIEKQEELQRRFLEAIEKREQERVVREEAWRMQEMQRINREREILAQERSIAAAKDAAVMAFLQKIAEHQQQEINLDPALNNVNSITVAPTPTPQQTQITATVPEAPQQVQALVPQPQPQPQQQQQQQIVVSSVVEINKADNNNGENLMMGGASSSRWPKVEVQALINLRTNLETKYQENGPKGPLWEEISALMRKMGYNRNAKRCKEKWENINKYFKKVKESNKKRPQDSKTCPYFHQLEALYKEKNKGEGQLMKPESMMAPLMVQPEQQWPPQTHVVPPEVTMEDAQDDPMDQLHHEDDEEEEDDKDIGDEDEDEDYEGGGNYEIVASKPASAEAATTGGE 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0715 649 CDD GT1 462 527 - -
Aed7g0715 649 Gene3D - 63 124 - -
Aed7g0715 649 Gene3D - 464 525 - -
Aed7g0715 649 MobiDBLite consensus disorder prediction 1 62 - -
Aed7g0715 649 SMART sant 59 121 IPR001005 -
Aed7g0715 649 SMART sant 460 522 IPR001005 -
Aed7g0715 649 Pfam Myb/SANT-like DNA-binding domain 462 549 IPR044822 -
Aed7g0715 649 Pfam Myb/SANT-like DNA-binding domain 61 147 IPR044822 -
Aed7g0715 649 MobiDBLite consensus disorder prediction 579 649 - -
Aed7g0715 649 Coils Coil 297 328 - -
Aed7g0715 649 PANTHER - 1 639 - -
Aed7g0715 649 CDD GT1 61 126 - -
Aed7g0715 649 ProSiteProfiles Myb-like domain profile. 462 520 IPR001005 -
Aed7g0715 649 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 639 - -
Aed7g0715 649 MobiDBLite consensus disorder prediction 264 281 - -
Aed7g0715 649 MobiDBLite consensus disorder prediction 189 218 - -
Aed7g0715 649 ProSiteProfiles Myb-like domain profile. 55 119 IPR001005 -
Aed7g0715 649 MobiDBLite consensus disorder prediction 602 628 - -
Aed7g0715 649 MobiDBLite consensus disorder prediction 264 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0715 Aed-Chr7 5337570 5342602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0715 52 578 Trihelix Transcription Factor Family AT1G76880 55.720 6.47e-171 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Aed7g0715 Myb_DNA-bind_4 8.8e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0715 - - gmx:547624 745.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0715 7 5337570 5342602 Aed1g2349 1 19529452 19532962 PCT