Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0708 ATGTCAAAAAATGAAACATCCTTCAACCTTAACCAAGCCAAATCTGTTCTTTCAACCAATGACCTTGAGCAGCAGCAGCAACAAGCAGCAACAGCTCTAGAGATTGAATCTGATGAGGACAACTTTGACTACTCAAAAAGATCTCAATGGCTCCGTGCTGCTGTTTTAGGAGCCAATGATGGGTTGGTCTCAACAGCATCACTGATGATGGGTGTTGGAGCGGTGAGGCATGACATCAAGGCCATGATCCTATCAGGGTTTGCAGGGTTGGTGGCAGGAGCATGCAGCATGGCCATAGGGGAGTTTGTCTCTGTTTACTCACAACTAGACATTGAGGTTGCTCAAAGGAAGAGAGAGAAGGAAAGGGGACAAAGTAGAGGAGAAGAAGATGAAAATGGAGAGAGTTTGCCAAACCCTTTGCAAGCTGCTGCAGCATCAGCTTTGGCCTTTTCTGTTGGTGCAATGGTGCCATTGCTTGCAGCTTCGTTTATAAAGGAGTATGAGGTTAGGGTTGGTGTGATTGTGGCTGCTGTGACCATTGCTTTGGTTGTGTTTGGTTGGTTAGGTGCTGTGTTGGGTAAGGCTCCAGTTTTGAGGTCTGCTTTCAGGGTCTTGTTTGGAGGTTGGATGGCCATGGCCATCACTTTTGGGCTAACCAAGTTGATTGGATCAAGTGCACTCTAG 684 0.4693 MSKNETSFNLNQAKSVLSTNDLEQQQQQAATALEIESDEDNFDYSKRSQWLRAAVLGANDGLVSTASLMMGVGAVRHDIKAMILSGFAGLVAGACSMAIGEFVSVYSQLDIEVAQRKREKERGQSRGEEDENGESLPNPLQAAAASALAFSVGAMVPLLAASFIKEYEVRVGVIVAAVTIALVVFGWLGAVLGKAPVLRSAFRVLFGGWMAMAITFGLTKLIGSSAL 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0708 227 CDD Nodulin-21 49 196 - -
Aed7g0708 227 Pfam VIT family 132 219 IPR008217 GO:0005384|GO:0030026
Aed7g0708 227 Pfam VIT family 51 129 IPR008217 GO:0005384|GO:0030026
Aed7g0708 227 MobiDBLite consensus disorder prediction 117 136 - -
Aed7g0708 227 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 1-RELATED 23 224 - -
Aed7g0708 227 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 23 224 IPR008217 GO:0005384|GO:0030026
Aed7g0708 227 MobiDBLite consensus disorder prediction 117 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0708 Aed-Chr7 5252413 5253096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0708 33 227 Nodulin-like Gene Family AT3G43660 73.469 2.42e-100 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0708 K22736 - gmx:100807991 360.147
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0708 7 5252413 5253096 Aed1g2344 1 19479514 19480155 PCT