Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0693 ATGGCAAAGGTAAGGGATCAGAAGCTATACGTCACCGTTCCGAATCTCTTTCGCTGCCCAATCTCCATGGACGTTATGCGCTCCCCCGTAAGCCTCTGCACCGGCGTCACATACGATCGCGCCAGCATTCAGCGCTGGCTCGACACAGGACACGACACGTGTCCCGCTACCATGCAGGTTCTTCCCTCCAAAGACTTCATTCCCAATCTCACGCTTCATCGTCTCATCCGCCTCTGGCTACTCTCCGCCGAACCTCCCTCGCCGGAGCCCCGTCCCTCCGCCGACCACCTCCATCCACTCCTCCGCAAAATCCACACCCCCGACGAAGACCTCGCCGCAACGCTCTCCAAAATCGCCGAATTCGCCAAAATCTCCGGCGAGAATCGCCGGTTGCTATCCACCTTCCCTGGTTTTGACTCCTCCCTAGTCCGCGCACTCGCCGGAAGCAATTCACTGCTTGACGCGGCTCAAAACGCGATCTATCTTCTCGATTTGGTTTTCCGGCTGAACGGAAATTCAGAAAAGATCCGGAAGCTGATTCTCGATGCTCGCGAGCAGTGCTTTGACTCGATGATGTTTGTTCTGAGAAACGGATCTCTGAAATCGAAAATTGAAACGGTTAGTTTTTTGGAGTTTCTCGCGCACGATTTCCAGTCTTCGAAATCCATCACGGAGACGCGAGAATTGTTGCCGTTGGTCGCGAGTTTTTTAAAGGACGGCGGAGAGGAGTTAAAAGATGCCGTTTTGTCGTTACTCTGCGTCGTTTCGGTGACACACTCGGCGAAGGTGGAACTCGTTAGCTCTGGAATCGTCGAGGTGGTTACGAAATTGTTGCGAGAGTGTTCGGCGGCCACGGCGGAGAGGTGCCTGAGGATGCTGGCGGTGTTGGCGACGTGCGCGGAGGGAAGAGCGGCGATGGCAGCGGAGACTTCTTGCGCGGCGGCGGTGGTGGAGAGAATGGCGAAGGCATCGAAGGCTGCGGCGAAGGACGCCGTGGCGGTGCTGTGGAGCTTGTGCTGTTTGTGCGGCGGGAATGTGAAGGTGCGAGATGACGTGGCAAAGCGAAACGGTGTCGTTGTGATTTTGTTGATTATGCAGAGGGGGTGGGAGGAGCACGTGAGGAGCATGTGCGTGGATTTGATTAAGGTTTTGAAGGGTTTGTGTAAGAACGGGTTGGGGTTGGATTTAGGATGCTATGACACCAAAACCACTCATATCAAACCTTGCTAA 1230 0.5504 MAKVRDQKLYVTVPNLFRCPISMDVMRSPVSLCTGVTYDRASIQRWLDTGHDTCPATMQVLPSKDFIPNLTLHRLIRLWLLSAEPPSPEPRPSADHLHPLLRKIHTPDEDLAATLSKIAEFAKISGENRRLLSTFPGFDSSLVRALAGSNSLLDAAQNAIYLLDLVFRLNGNSEKIRKLILDAREQCFDSMMFVLRNGSLKSKIETVSFLEFLAHDFQSSKSITETRELLPLVASFLKDGGEELKDAVLSLLCVVSVTHSAKVELVSSGIVEVVTKLLRECSAATAERCLRMLAVLATCAEGRAAMAAETSCAAAVVERMAKASKAAAKDAVAVLWSLCCLCGGNVKVRDDVAKRNGVVVILLIMQRGWEEHVRSMCVDLIKVLKGLCKNGLGLDLGCYDTKTTHIKPC 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0693 409 CDD RING-Ubox_PUB 17 59 IPR045210 -
Aed7g0693 409 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 7 409 - -
Aed7g0693 409 Pfam U-box domain 13 82 IPR003613 GO:0004842|GO:0016567
Aed7g0693 409 SMART Ubox_2 16 79 IPR003613 GO:0004842|GO:0016567
Aed7g0693 409 ProSiteProfiles U-box domain profile. 12 86 IPR003613 GO:0004842|GO:0016567
Aed7g0693 409 SUPERFAMILY ARM repeat 99 384 IPR016024 -
Aed7g0693 409 SUPERFAMILY RING/U-box 9 82 - -
Aed7g0693 409 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 12 81 IPR013083 -
Aed7g0693 409 PANTHER WDSAM1 PROTEIN 7 409 IPR045185 GO:0061630
Aed7g0693 409 Gene3D - 82 392 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0693 Aed-Chr7 5138501 5139730 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0693 4 408 U-box Gene Family AT5G09800 38.278 2.94e-79 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0693 - - gmx:100811783 636.336