Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0692 TGTACTTTTACATCCTCCGATTCTCTCTCTCTCTCTCTTCACCTTTCACTGTTTTTTTTTTCTCTCTCTCTCCTCTGTCTCCCCGCCGGAGCCAACATTCGTCGCCGGAGTTTCCTTTCGGAAACTGCTCTTCCGCCGCGAGCCACCGCGACCCTTTCGAGAGCCCTGTTCAACAAGCTCGAAAGTCTGGTTTTTTCCCGGTTCGAGAAAACCGGTTTGGTCTTTGACTTGGAAACCGTGAGTGGAGTTGAAGGGATTTTGGGTTCTGCAAAGAGGTGCGGATCCGGGAAGGTTCTAGAGAGAGAATACAAAGTGAGAGAGAGGTTTTGGTTTGATGTGAGGGTGAATGGTTGTGGAAAGAATAAGAGGTTGGAGTTTTCGATGATGACCGGAGCTCCGGCGAGTGATCGGAGAGGGTGGTGGCGCGTCGATCTTGCTAGCTCCGGGAATGCCAACCGTGACATTGAACAAGCTGTTTTCCAACGTTACTTGCGCCCTGAGAAGGACTATTTGTCTTTCTCACTTATTTACAGTAACGGAAAGCGATCTCTTGATTTGATTTGCAAAGATAAAGTTGAGGCAGAAGGGTGGATTGCTGGCCTCAAAGCACTGATATCTTCTGGTCAAGGTGGTCGGTCCAAAATTGATGGATGGAGTGATGGGGGCCTCATTCTTGATGATAGCAGAGACTTAATATCAAATAGTCCAAGTGAAAGTTCTGCTAGCACGTCACGAGGCATCAGTTCTCCTGACATTCCTGCTACTCTTCCAAAAACTTCACCAACGTCCTTTCGGCCTGACAATACAATTTCTGAAAGGTCACATGCACCACCGGACCCAACAAACATGCAAGTGAAAGGATCTGCTTCAGATGTATTTCGTGTCAGTGTTTCGAGTGCCCCCAGTACATCTAGTCATGGATCTGCACCTGATGACTATGATGCTCTGGGGGATGTATACATATGGGGAGAGATTATCTGTGAAAATGTTAAAGTTGGTGCTGATAAAAATGTAAATTGTTTCAGCCCAAGGGCAGATGTACTTCTCCCCAGACCACTGGAATCCAATGTAGTTTTAGATGTACATCATATAGCATGTGGTGTTAGACATGCTTCTCTAGTCACTAGGCAAGGTGAAGTTTTTACATGGGGCGAAGAATCAGGAGGACGCCTTGGCCATGGTGTTGGGAAGAATGTGGTTCAACCTCGTCTACTTGAAGCATTGACTTCTACAACCGTTGATTTTGTTGCCTGTGGGGAGTTCCATTCCTGTGCTGTTACAATGGCTGGGGAACTATATACCTGGGGTGATGGTACTCATAATGCTGGGCTTCTTGGTCATGGCAGTAATGTTAGTCATTGGATACCGAAGAGAATTGCTGGTCCATTAGAGGGACTTCAAATTGCATTTGTTGCTTGTGGTCCATGGCACACGGCCTTGATAACTTCAACAGGGCAGCTGTTTACATTTGGTGATGGAACATTTGGTGTTTTGGGCCATGGAGATAGGGAAAATGTTTCATATCCTAGAGAAGTGGAATCCTTATTGGGATTGAGAACAATAGCTGTTGCTTGTGGAGTGTGGCATACTGCAGCTGTTGTAGAGGTTATTGCAACACACTCCGGTACAAGCATATCATCAGGTAAATTGTTTACTTGGGGTGATGGAGACAAAAATCGCCTTGGGCATGGGGACAAAGAGGCACGTCTTAAACCAACTTGTGTGCCTGCACTTATTGATTACAATTTTCATAAAATTGCTTGTGGGCACAGTTTAACAGCAGGCCTGACAACATCTGGACGTGTTTTCATTATGGGAAGTACTGTTTATGGTCAGCTTGGGAATCCTCAATCTGATGGAAAGGTTCCATGCTTGGTTGGAGACAAGATTGCTGGGGAATTTGTTGAAGAAATTGCATGTGGTGCATATCATGTGGCCGTATTAACATCCAAAAATGAAGTTTATACTTGGGGGAAAGGTGCAAATGGGAGATTAGGTCATGGAGATATTGAAGATCGTAAAACACCGGTTTTGGTTGAAGCATTGAAGGATAGACATGTGAAATATATTGCATGTGGTTCAAACTACTCTGCTGCCATATGCCTTCATAAGTGGGTATCTGGTGCTGAGCAGTCTCAGTGCTCTACTTGTAGACAGGCATTTGGCTTCACTAGAAAGAGGCACAATTGTTATAATTGTGGACTCGTCCACTGCCATTCGTGCAGTTCAAGGAAAGCATTAAGAGCAGCACACGCTCCTAATCCTGGCAAGCCATACCGTGTGTGTGATTCTTGTTATGCAAAATTGAACAAGGTTGCCGAAGCTAGCAATAGTAATAGAAGGAATGCCTTGCCTCGTCTGTCAGGTGAGAACAAGGATAGGCTAGACAAGTCTGACCTAAGATTGTCCAAGGCAGTTATTCCTTCTAACATGGATTTGATTAAGCAGTTAGATAGTAAGGCAGCCAAGCAAGGAAAGAAAGGTGATACATTCTCACTGGTTCGCCCCTCACAACCACCTTCTTTGCTACAGCTGAAAGATGTTGTCTTGTCCACTGCTCTTGATCTGAGACGAACAGTTCCAAAACCGGTAGTTGCACCATCAGGAGTAAGTTCCAGATCTGTGTCCCCTTTCTCTAGAAGACCAAGCCCCCCTCGTTCAGCTACACCTATTCCTACAACTTCTGGACTTTCCTTCTCGAAAAGTGTTGCTGATAGTTTGAAGAAAACAAATGAACTTTTAAATCAAGAAGTGCAGAAGTTGCATGCCCAGGTTGAGAGCCTGAGACAGAGATGTGAACTGCAAGAATTAGAGCTTCAAAGGTCAGCAAAAAAGACTCAAGAAGCTATGGCACTGGCTGCTGAGGAATCTGCTAAATGTAAAGCTGCAAAAGAAGTTATTAAGTCACTCACAGCACAGTTCAAAGATCTGGCTGAGAAACTTCCTCCTGGAGTTTATGATGCTGAGAACATTAGACCAGCTTATCTACCAAATGGTCTTGAGCCAAATGGCATCCACCATCCAGATTCAAATGGGGAGCAGCAGCACTCCAGAGCAGAGTCAATCAGTGGCTCTAGTTTGGCCTCCATGAAACTTGAATCCACTCTACTGAATAAAACTGCGTGGAATTTGCCAGGAACTTATGGAACTAATCTTCACCAGCAAATGCGGAGCCCCATTTCCTCTAACGGGACCAACAATTATCCAGATGTTAAATTGTCAAATGGCGGTGGTGTAATTCAGGCAAGCAGCGGTAGCATGTCAGATACTGCTGATGGTAGGGATTCTGGGAATTTCCACGATGACGAGAGTGGTTCGAAATCGAGGAATGCTGCACCATCTGCTAGTAGTAATCAAGTTGAGGCAGAATGGATTGAACAGTATGAACCTGGTGTCTACATAACACTCGTGGCACTGCATGATGGAACGAGAGATCTGAAGCGAGTGCGCTTCAGCCGAAGGAGATTTGGAGAGCACCAAGCAGAAACGTGGTGGTCAGAGAACCGGGACAAGGTATATGAAAAATACAACGTTCGAAGCACAGACAAGTCTGCCAGCCAAGCGGCACGTAGTTCTGAAGGTGCAGGTTCGCCAATTTCCCAAACTTAG 3609 0.4541 CTFTSSDSLSLSLHLSLFFFSLSLLCLPAGANIRRRSFLSETALPPRATATLSRALFNKLESLVFSRFEKTGLVFDLETVSGVEGILGSAKRCGSGKVLEREYKVRERFWFDVRVNGCGKNKRLEFSMMTGAPASDRRGWWRVDLASSGNANRDIEQAVFQRYLRPEKDYLSFSLIYSNGKRSLDLICKDKVEAEGWIAGLKALISSGQGGRSKIDGWSDGGLILDDSRDLISNSPSESSASTSRGISSPDIPATLPKTSPTSFRPDNTISERSHAPPDPTNMQVKGSASDVFRVSVSSAPSTSSHGSAPDDYDALGDVYIWGEIICENVKVGADKNVNCFSPRADVLLPRPLESNVVLDVHHIACGVRHASLVTRQGEVFTWGEESGGRLGHGVGKNVVQPRLLEALTSTTVDFVACGEFHSCAVTMAGELYTWGDGTHNAGLLGHGSNVSHWIPKRIAGPLEGLQIAFVACGPWHTALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVESLLGLRTIAVACGVWHTAAVVEVIATHSGTSISSGKLFTWGDGDKNRLGHGDKEARLKPTCVPALIDYNFHKIACGHSLTAGLTTSGRVFIMGSTVYGQLGNPQSDGKVPCLVGDKIAGEFVEEIACGAYHVAVLTSKNEVYTWGKGANGRLGHGDIEDRKTPVLVEALKDRHVKYIACGSNYSAAICLHKWVSGAEQSQCSTCRQAFGFTRKRHNCYNCGLVHCHSCSSRKALRAAHAPNPGKPYRVCDSCYAKLNKVAEASNSNRRNALPRLSGENKDRLDKSDLRLSKAVIPSNMDLIKQLDSKAAKQGKKGDTFSLVRPSQPPSLLQLKDVVLSTALDLRRTVPKPVVAPSGVSSRSVSPFSRRPSPPRSATPIPTTSGLSFSKSVADSLKKTNELLNQEVQKLHAQVESLRQRCELQELELQRSAKKTQEAMALAAEESAKCKAAKEVIKSLTAQFKDLAEKLPPGVYDAENIRPAYLPNGLEPNGIHHPDSNGEQQHSRAESISGSSLASMKLESTLLNKTAWNLPGTYGTNLHQQMRSPISSNGTNNYPDVKLSNGGGVIQASSGSMSDTADGRDSGNFHDDESGSKSRNAAPSASSNQVEAEWIEQYEPGVYITLVALHDGTRDLKRVRFSRRRFGEHQAETWWSENRDKVYEKYNVRSTDKSASQAARSSEGAGSPISQT 1202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0692 1202 MobiDBLite consensus disorder prediction 1053 1118 - -
Aed7g0692 1202 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 317 377 IPR000408 -
Aed7g0692 1202 SUPERFAMILY RCC1/BLIP-II 316 705 IPR009091 -
Aed7g0692 1202 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 708 770 IPR017455 -
Aed7g0692 1202 PRINTS Chromosome condensation regulator RCC1 signature 430 446 IPR000408 -
Aed7g0692 1202 PRINTS Chromosome condensation regulator RCC1 signature 647 668 IPR000408 -
Aed7g0692 1202 PRINTS Chromosome condensation regulator RCC1 signature 471 487 IPR000408 -
Aed7g0692 1202 PRINTS Chromosome condensation regulator RCC1 signature 487 501 IPR000408 -
Aed7g0692 1202 PRINTS Chromosome condensation regulator RCC1 signature 589 607 IPR000408 -
Aed7g0692 1202 PRINTS Chromosome condensation regulator RCC1 signature 380 396 IPR000408 -
Aed7g0692 1202 Coils Coil 904 945 - -
Aed7g0692 1202 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 485 536 IPR000408 -
Aed7g0692 1202 Pfam Transcription factor BRX N-terminal domain 955 990 IPR027988 -
Aed7g0692 1202 Gene3D - 271 540 IPR009091 -
Aed7g0692 1202 ProSiteProfiles BRX domain profile. 1122 1177 IPR013591 -
Aed7g0692 1202 SUPERFAMILY PH domain-like 158 205 - -
Aed7g0692 1202 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 430 484 IPR000408 -
Aed7g0692 1202 MobiDBLite consensus disorder prediction 1053 1093 - -
Aed7g0692 1202 SMART fyve_4 702 771 IPR000306 GO:0046872
Aed7g0692 1202 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 156 1183 - -
Aed7g0692 1202 MobiDBLite consensus disorder prediction 997 1024 - -
Aed7g0692 1202 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 378 429 IPR000408 -
Aed7g0692 1202 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 548 599 IPR000408 -
Aed7g0692 1202 PANTHER REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-CONTAINING PROTEIN 156 1183 - -
Aed7g0692 1202 Pfam FYVE zinc finger 704 770 IPR000306 GO:0046872
Aed7g0692 1202 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 471 481 IPR000408 -
Aed7g0692 1202 SUPERFAMILY FYVE/PHD zinc finger 704 779 IPR011011 -
Aed7g0692 1202 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 523 533 IPR000408 -
Aed7g0692 1202 Coils Coil 953 980 - -
Aed7g0692 1202 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 701 777 IPR013083 -
Aed7g0692 1202 Gene3D - 153 211 IPR011993 -
Aed7g0692 1202 Gene3D - 541 700 IPR009091 -
Aed7g0692 1202 CDD FYVE_like_SF 713 766 - -
Aed7g0692 1202 MobiDBLite consensus disorder prediction 1179 1202 - -
Aed7g0692 1202 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 600 651 IPR000408 -
Aed7g0692 1202 MobiDBLite consensus disorder prediction 863 897 - -
Aed7g0692 1202 MobiDBLite consensus disorder prediction 234 286 - -
Aed7g0692 1202 Pfam Regulator of chromosome condensation (RCC1) repeat 378 426 IPR000408 -
Aed7g0692 1202 Pfam Regulator of chromosome condensation (RCC1) repeat 485 533 IPR000408 -
Aed7g0692 1202 Pfam Regulator of chromosome condensation (RCC1) repeat 547 594 IPR000408 -
Aed7g0692 1202 Pfam Regulator of chromosome condensation (RCC1) repeat 599 648 IPR000408 -
Aed7g0692 1202 Pfam Regulator of chromosome condensation (RCC1) repeat 430 481 IPR000408 -
Aed7g0692 1202 Pfam Regulator of chromosome condensation (RCC1) repeat 653 700 IPR000408 -
Aed7g0692 1202 Pfam Transcription factor regulating root and shoot growth via Pin3 1121 1176 IPR013591 -
Aed7g0692 1202 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 652 703 IPR000408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0692 Aed-Chr7 5121295 5129038 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0692 1123 1193 Major Intrinsic Protein MIP AT1G31880 51.389 3.26e-15 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0692 - - gmx:100805364 1916.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0692 7 5121295 5129038 Aed1g2336 1 19392356 19401571 PCT