Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0675 ATGGAACAGAAGCATGTTCTGCTGTCAGCATTGAGTGTTGGGGTTGGGTTGGGTGTGGGGCTTGGGTTGAGCTCAGGGCAGAAATGGGTTGGCGGGAATCGTGATTCCGATGAGCTTTCTGTGGAGCAGATTGTTCAGGAGCTCAAGGCTCTGGTGGTTGAAGGAAGGAACAGCAAGGTTACATTTGAGGACTTTCCTTATTACTTAAGTGAAAGAACTCGAGTTTTGTTGACAAGTGCCGCAAATGTTCATTTAAAACATCTTCAATTTTCCAAGCACACCAGGAACCTCTCACCAGCAAGCAGAGCTATTTTGCTATCTGGTCCAGCAGAACTTTACCAGCAAACGCTTGCCAAAGCTTTAGCACATAACTTTGACTCAAAGTTGCTGTTGTTAGATATTACTGACTTCTCTGTGAAGTTGCAGAACAAATTTGGATGTTCTAGAAAAGAACCATCTCTCAAAAGGTCAATATCTGAGGCGACTTTGGAGCGAATGTCTGGTTTGTTTGGTTCCTTTTCAATGCTTTCTTCAACAGGAGAAACAAGAGGAATTCTGCGTCAACAAATCAGTGCTGCTGAAAGTTCCAATCCTCCAAAGCTTAGGAGGAATGGCTCTGCTGCATCTGATATAAGTAGCACTTCTTCCCAATGTGGTCCAGCATTTCCAGCTCCTTTAAAGCGCACAGGTAGCTTGTGTTTTGATGAAAAGCTCTTTGTGCAGTCACTTTACAAGCTTTTGGTTTCTATCACAGAAACTAGTTCCATCATTTTGTACATCAGGGATGTTGAGAAGCTCATTCTCCAATCACCAAGGTTATATAATTTACTACAAAAAATGATAAAGAAACTATCAGGCTCGGTGTTGATACTTGGTTCCCAGATATTAGATTCAGAAGATGATTGCAAAGAAGTTGATGAAAGGCTCACTGCGGTATTCCCCTACAACATTAAGGACAAAGCTCTGGAAGATGAAACTCATCTTGGAAGTTGGAAAGGCCAACTGGAAGAGGACATGAAAGATATTCAGTTCCAAGATAACAGAAACCACATTGCTGAAGTACTAGCAGAAAATGACATTGACTGTGTTGACTTGAACTCAATCTGCCATGCAGACACTATCTTACTCAGCAAGTATATTGAAGAAATTGTAGTATCTGCAATATCTTACCATTTAATGAAAACCACGGATCCAGAATACCGAAATGGAAAGCTAGTCATATCAGCCAATAGTTTGTCCCATGGATTGAGTCTGTTCCAGGAAGGCAAGAGTAGTGGGAATCTGAAGACTAATGAATCTAACAAGGAAAATGCTGGAGAAGATATTACGGGTGCAAAGAGTGAAGTGAAGTGTGACAACATAGCATCTGAAAACAAGAGCGAGACAGAGAAATCCATCCCAGTAACAAAGAAAGATGGCGAAAATCCCACACCTGCAAAAGCAGAAGTTCCTGACAATGAGTTTGAGAAGCGCATAAGACCAGAGGTTATCCCTGCAAATGAGATAGGAGTTACTTTTGCAGATATTGGTGCATTAGATGAGACCAAAGAATCACTTCAAGAGTTGGTAATGCTTCCCCTTAGAAGGCCAGATCTCTTCAAAGGTGGGCTTCTGAAACCATGTAGAGGTATATTGCTTTTTGGGCCTCCTGGTACTGGGAAAACAATGTTAGCAAAGGCCATTGCAAATGAAGCTGGTGCAAGTTTCATTAATGTCTCAATGTCCACCATCACATCAAAATGGTTTGGAGAGGATGAAAAGAACGTCCGAGCTCTGTTCACACTGGCAGCTAAGGTTGCCCCAACAATTATCTTTGTTGACGAGGTTGACAGCATGCTTGGACAGAGGACTAGAGTAGGAGAGCATGAGGCCATGAGGAAGATTAAAAATGAATTCATGACACACTGGGATGGGCTATTAACAGGACCTAATGAGCGAATTTTGGTTCTTGCTGCAACCAACAGGCCATTTGACCTTGATGAAGCTATCATAAGACGGTTTGAGCGCAGGATCTTGGTTGGTCTTCCATCTGCTGAGAACAGGGAAATGATCTTGAAGACTCTTTTGGCTAAAGAAAAACATGAAAACTTAGACTTCAAAGAGCTGGGAATCATGACAGAAGGATATACTGGAAGTGATCTTAAGAATTTGTGCATCACTGCGGCTTATCGACCTGTTAGGGAGCTAATACAGCAGGAGAGAAAGAAAGACATGGTAGAAAAGAAGAAAAGAGAAGCAGAAGGCCAAACCTCTGAAGATGCTTCAAACAATAAAGATAAAGAAGAACAAGAAATTACCCTGAGGCCTTTAAACATGGAAGACATGAGACAGGCTAAGAGTCAGGTGGCTGCAAGTTTTGCGTCAGAAGGATCTGTAATGAATGAGTTGAAGCAATGGAATGATTTGTATGGAGAAGGAGGTTCAAGGAAGAAACAACAGCTCACTTACTTCCTCTAG 2457 0.4196 MEQKHVLLSALSVGVGLGVGLGLSSGQKWVGGNRDSDELSVEQIVQELKALVVEGRNSKVTFEDFPYYLSERTRVLLTSAANVHLKHLQFSKHTRNLSPASRAILLSGPAELYQQTLAKALAHNFDSKLLLLDITDFSVKLQNKFGCSRKEPSLKRSISEATLERMSGLFGSFSMLSSTGETRGILRQQISAAESSNPPKLRRNGSAASDISSTSSQCGPAFPAPLKRTGSLCFDEKLFVQSLYKLLVSITETSSIILYIRDVEKLILQSPRLYNLLQKMIKKLSGSVLILGSQILDSEDDCKEVDERLTAVFPYNIKDKALEDETHLGSWKGQLEEDMKDIQFQDNRNHIAEVLAENDIDCVDLNSICHADTILLSKYIEEIVVSAISYHLMKTTDPEYRNGKLVISANSLSHGLSLFQEGKSSGNLKTNESNKENAGEDITGAKSEVKCDNIASENKSETEKSIPVTKKDGENPTPAKAEVPDNEFEKRIRPEVIPANEIGVTFADIGALDETKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLLTGPNERILVLAATNRPFDLDEAIIRRFERRILVGLPSAENREMILKTLLAKEKHENLDFKELGIMTEGYTGSDLKNLCITAAYRPVRELIQQERKKDMVEKKKREAEGQTSEDASNNKDKEEQEITLRPLNMEDMRQAKSQVAASFASEGSVMNELKQWNDLYGEGGSRKKQQLTYFL 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0675 818 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 1 818 - -
Aed7g0675 818 Coils Coil 729 749 - -
Aed7g0675 818 Gene3D - 676 753 - -
Aed7g0675 818 CDD AAA 542 675 - -
Aed7g0675 818 MobiDBLite consensus disorder prediction 734 769 - -
Aed7g0675 818 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 503 736 IPR027417 -
Aed7g0675 818 MobiDBLite consensus disorder prediction 422 486 - -
Aed7g0675 818 SMART AAA_5 540 677 IPR003593 -
Aed7g0675 818 Pfam AAA+ lid domain 696 738 IPR041569 -
Aed7g0675 818 MobiDBLite consensus disorder prediction 734 772 - -
Aed7g0675 818 Gene3D - 503 675 IPR027417 -
Aed7g0675 818 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 818 - -
Aed7g0675 818 MobiDBLite consensus disorder prediction 192 218 - -
Aed7g0675 818 MobiDBLite consensus disorder prediction 434 486 - -
Aed7g0675 818 Pfam ATPase family associated with various cellular activities (AAA) 544 674 IPR003959 GO:0005524|GO:0016887
Aed7g0675 818 ProSitePatterns AAA-protein family signature. 647 666 IPR003960 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0675 Aed-Chr7 4968780 4979960 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0675 504 733 Calmodulin-binding Proteins AT3G56690 39.407 3.46e-41 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0675 - - gmx:100804099 1450.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0675 7 4968780 4979960 Aed7g0675 7 4968780 4979960 ECH
Aed7g0675 7 4968780 4979960 Aed1g2319 1 19210460 19217885 PCT