Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0657 ATGGCTTCCGATCTCGAAGCAAAAGCCAAAGAGGCCTTCGTCGAAGACCACTTCGAACTCGCCGTGGACCTTCTCTCTCAGGCTATTAATCTCGAACCCAACAAAGCCGAACTCTACGCCGACCGCGCCCAAGCCAACATCAAACTCAATAGCTTCACTGAGGCTGTTGCTGATGCTAGCAAAGCCATTGAATTGAATCCTTCTCTACCAAAAGCATATTTGCGGAAAGGTGCTGCATGCATGAAGCTTGAGGAATATGAGACTGCAAAGGCTGCCCTGGAGGTGGGTGCATCATTGTCTCCAGACAACTCAAGGTTTGATACTTTGATCAAAGAATGTGATAAGCTCATTGCAGAAGAATCTTATACCATACCTATACAGGAAAAGACCACAACACAGGATGTTACTCCAAAAGATGTTCAGCAGCAGGATGATCTTCTAGAGCAGCCAACAGTTGCAGTGACTAAACCTAAATATAGGCATGAATTCTACCAGAAACCTGATGAGGTGGTTGTAACTATATTTGCAAAGAAAATCCCAAAGGAAAGCATTACTGTCGACTTCGGTGAACAAATACTAAGTGTTAGTATTAATGTACCTGGAGAAGATGCATATGTTTTTCAACCTCGCTTATTTGGAAAGATTGTACCTTCCAATTGCCGATATGAAGTTTTGTCCACCAAAATTGAAATTCGCCTTGTGAAAGCAGAACCTATTCAGTGGACATCTCTAGAATTCACCAGTGGCATTGTTGTACCACAGAGGGTTAATGCTTCTTTAGCTACTGGAAGTCAAAGACCTTCTTACCCGTCCTCAAAACCAACAAGAGACTGGGACAAGATTGAAGCTCAAGTCAAGAAAGAGGTGGAGTCTAATGGGACAGTGCTGTCTACAAACTGGAAAGAAGTGGGATTAAAGAAAGTCGAGGGAAGTCCTCCTGATGGCATGGAGTTGAAGAAATGGGAATATTAA 972 0.4321 MASDLEAKAKEAFVEDHFELAVDLLSQAINLEPNKAELYADRAQANIKLNSFTEAVADASKAIELNPSLPKAYLRKGAACMKLEEYETAKAALEVGASLSPDNSRFDTLIKECDKLIAEESYTIPIQEKTTTQDVTPKDVQQQDDLLEQPTVAVTKPKYRHEFYQKPDEVVVTIFAKKIPKESITVDFGEQILSVSINVPGEDAYVFQPRLFGKIVPSNCRYEVLSTKIEIRLVKAEPIQWTSLEFTSGIVVPQRVNASLATGSQRPSYPSSKPTRDWDKIEAQVKKEVESNGTVLSTNWKEVGLKKVEGSPPDGMELKKWEY 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0657 323 Pfam SGS domain 282 321 IPR007699 -
Aed7g0657 323 SUPERFAMILY TPR-like 3 113 IPR011990 GO:0005515
Aed7g0657 323 ProSiteProfiles CS domain profile. 156 245 IPR007052 -
Aed7g0657 323 PANTHER PHOSPHATASE-RELATED 1 288 - -
Aed7g0657 323 Pfam Tetratricopeptide repeat 36 68 IPR019734 GO:0005515
Aed7g0657 323 Pfam Tetratricopeptide repeat 71 103 IPR019734 GO:0005515
Aed7g0657 323 ProSiteProfiles TPR repeat profile. 70 103 IPR019734 GO:0005515
Aed7g0657 323 SMART tpr_5 36 69 IPR019734 GO:0005515
Aed7g0657 323 SMART tpr_5 2 35 IPR019734 GO:0005515
Aed7g0657 323 SMART tpr_5 70 103 IPR019734 GO:0005515
Aed7g0657 323 Gene3D Tetratricopeptide repeat domain 1 150 IPR011990 GO:0005515
Aed7g0657 323 ProSiteProfiles SGS domain profile. 230 323 IPR007699 -
Aed7g0657 323 PANTHER PHOSPHATASE-RELATED 289 323 - -
Aed7g0657 323 SUPERFAMILY HSP20-like chaperones 144 253 IPR008978 -
Aed7g0657 323 Gene3D - 157 247 IPR008978 -
Aed7g0657 323 Pfam CS domain 160 235 IPR007052 -
Aed7g0657 323 PANTHER PROTEIN SGT1 HOMOLOG 289 323 IPR044563 GO:0051087
Aed7g0657 323 PANTHER PROTEIN SGT1 HOMOLOG 1 288 IPR044563 GO:0051087
Aed7g0657 323 CDD p23_CS_SGT1_like 162 245 - -
Aed7g0657 323 ProSiteProfiles TPR repeat profile. 36 69 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0657 Aed-Chr7 4853210 4857479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0657 1 115 U-box Gene Family AT3G07370 26.891 1.21e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0657 K12795 - gmx:100780174 574.318