Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0654 ATGACTCATGAGGATTGGGATCTCTTTGCAATCGTTAGAAGTTGCAAAGTTGCTACCTATACTGCCACCACCACAAACACAGAAACCCCACCCACCACCACTCCTAGTAGATCCCCTAACACTAACGATGTGAGCCAAGAAAATGGTTCATTCTCTTTTCCCAATCTTGTGCAACCAACAACCAATGGGTTCCAAGAGCTTCACCAATTGCTAATAAACTTCAACCCCACCAGCACCATTACTAGCACTAGCACTATCACTAGTGGTCTTGGCATCAATCCCAATTCCACTTTTTCTGAAGTTGCAGGATTCATTGGACAACAGCAGATACAGCAAAGTCACCACCACCATCTCGTTCCTGCTCCCACAAATCACACCTCCATTGGAACACCCTCCACTACTCGTTTTGATAGATTCCAGCAACAGCAACCACAGCAAAACCAGCCACCCCTTCAAGCACCCCAAACATGTTCCATCCTTTCACCAACCACACAACCACAAGCACCCAGATCAAGAAAAAGAAAAAGCCAACAGAAGAAAATGGTGTGCCATGTAACCGCAGACAACCTCTCATCAGACACTTGGGCATGGCGAAAATATGGACAAAAACCCATCAAAGGCTCTCCATATCCAAGGAACTATTACAGATGCAGTAGCTGCAAAGGCTGCGCCGCCAGAAAGCAAGTAGAACGAAGCACAACCGAACCCAACATGTTCATCGTGACCTACACCGGTGATCACAAACACGCCAAACCCATTCACCGGAACTCACTCGCCGGAAGCACCAGAACGAGACCATCATCGACCCGTTTACCCGAAACCCATGAATCCGTGTCTTGTGTAAAAAAAGAAAACGCATGCTCTTCAAATTCCGAGCTTTCTCCCATGTCGTTAAGATCCGACACGCTGGAAAACGAGGAAACGGTGGCCGCCGGCGAACCCGATTGCCCGGACACGGAAATTAACCCTGATGAAAGCGACGACGACGTTTTGATACCCAACACGGGTGCCATGTCGGATGCTGTTCTCTTTGGGGCTGACCAATGTTGA 1050 0.4829 MTHEDWDLFAIVRSCKVATYTATTTNTETPPTTTPSRSPNTNDVSQENGSFSFPNLVQPTTNGFQELHQLLINFNPTSTITSTSTITSGLGINPNSTFSEVAGFIGQQQIQQSHHHHLVPAPTNHTSIGTPSTTRFDRFQQQQPQQNQPPLQAPQTCSILSPTTQPQAPRSRKRKSQQKKMVCHVTADNLSSDTWAWRKYGQKPIKGSPYPRNYYRCSSCKGCAARKQVERSTTEPNMFIVTYTGDHKHAKPIHRNSLAGSTRTRPSSTRLPETHESVSCVKKENACSSNSELSPMSLRSDTLENEETVAAGEPDCPDTEINPDESDDDVLIPNTGAMSDAVLFGADQC 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0654 349 SMART WRKY_cls 191 251 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed7g0654 349 MobiDBLite consensus disorder prediction 111 182 - -
Aed7g0654 349 MobiDBLite consensus disorder prediction 308 332 - -
Aed7g0654 349 ProSiteProfiles WRKY domain profile. 186 252 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed7g0654 349 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 4 343 IPR044810 GO:0003700
Aed7g0654 349 MobiDBLite consensus disorder prediction 23 48 - -
Aed7g0654 349 Pfam WRKY DNA -binding domain 193 249 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed7g0654 349 SUPERFAMILY WRKY DNA-binding domain 186 252 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed7g0654 349 PANTHER WRKY TRANSCRIPTION FACTOR 27-RELATED 4 343 - -
Aed7g0654 349 MobiDBLite consensus disorder prediction 111 171 - -
Aed7g0654 349 Gene3D WRKY domain 174 245 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed7g0654 349 MobiDBLite consensus disorder prediction 257 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0654 Aed-Chr7 4838345 4839723 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0654 170 265 WRKY Transcription Factor Family AT5G52830 79.167 6.61e-52 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed7g0654 WRKY 1.9e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0654 K13425 - gmx:100788213 533.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2311 1 19165258 19167148 Aed7g0654 7 4838345 4839723 ECH
Aed2g0627 2 4535860 4538034 Aed7g0654 7 4838345 4839723 ECH
Aed3g0581 3 4105222 4107254 Aed7g0654 7 4838345 4839723 ECH
Aed7g0654 7 4838345 4839723 Aed7g0654 7 4838345 4839723 ECH
Aed7g0654 7 4838345 4839723 Aed1g2311 1 19165258 19167148 PCT