Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0637 ATGGTATCCAACAACCCGAACCCGCCCGAGGGATTCTACTTGGATCCCAGTGGTGGCATGGCTCTCTCGGGGATGCCTCCCTTTGCCGCCGTCTCCGCCTCCGCTGCCGTGAACTCGTCGGAGGATGCCTCCAAGAAGATCCGCAAGCCCTACACCATCACCAAGTCGCGCGAGAACTGGACCGAACCCGAGCACGACAAGTTCCTCGAAGCTATTCAACTGTTTGACCGTGACTGGAAAAAGATTGAAGCATTTATTGGATCAAAGACTGTTATACAGATACGTAGCCATGCACAGAAATACTTTCTAAAAGTTCAGAAGAGTGGGACAAGTGAACATCTTCCGCCACCCAGGCCTAAAAGAAAAGCTGCCCATCCATATCCTCAAAAAGCTTCCAAAAATGCTCCTGTACTCTCACAAGTATCAGGACCTTTTCAGTCTTCATCTGCTTTGCTTGAACCTGGATTTATCTTGAAGAATGATGCCCCACCAATGCTTAAAACTCCTATTATGAACACTGAGGCATCGTCCTGGTCAAACAACACCTTGCAAACTGTCAATTTATCTCCTGTGACAAAAGTGGACAATCCTTGCAGTAGTGGTGAAAGCACTCCTAAAATGCGGCCAGTTGGTGAATCTAATGGTCAAGGGACTAAAATCCATCCATTGAGAGGCAAGGTATATGGCTTCATTGGCAGTGTATTTGACCCAAATGCAACTGAGCATCTGCAGAAATTAAAAAAGATGGACCGTATAGATGTTGAGACGGTGCTACTGTTAATGAGAAACCTGTCCATCAATTTAGCTAGCCCAGATTTTGAGGATCATAGAAAGGTGCTTTCATCATATGAGGTTGAAGCAGAGAGAGATAATAACTATCAATGCGGATAG 891 0.459 MVSNNPNPPEGFYLDPSGGMALSGMPPFAAVSASAAVNSSEDASKKIRKPYTITKSRENWTEPEHDKFLEAIQLFDRDWKKIEAFIGSKTVIQIRSHAQKYFLKVQKSGTSEHLPPPRPKRKAAHPYPQKASKNAPVLSQVSGPFQSSSALLEPGFILKNDAPPMLKTPIMNTEASSWSNNTLQTVNLSPVTKVDNPCSSGESTPKMRPVGESNGQGTKIHPLRGKVYGFIGSVFDPNATEHLQKLKKMDRIDVETVLLLMRNLSINLASPDFEDHRKVLSSYEVEAERDNNYQCG 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0637 296 PANTHER SWI/SNF COMPLEX-RELATED 3 292 - -
Aed7g0637 296 ProSiteProfiles SANT domain profile. 55 106 IPR017884 -
Aed7g0637 296 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 52 106 IPR017930 -
Aed7g0637 296 PANTHER PROTEIN REVEILLE 6 3 292 - -
Aed7g0637 296 Gene3D - 59 107 - -
Aed7g0637 296 ProSiteProfiles Myb-like domain profile. 52 102 IPR001005 -
Aed7g0637 296 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 55 104 IPR006447 GO:0003677
Aed7g0637 296 CDD SANT 59 102 IPR001005 -
Aed7g0637 296 MobiDBLite consensus disorder prediction 107 136 - -
Aed7g0637 296 MobiDBLite consensus disorder prediction 191 219 - -
Aed7g0637 296 Pfam Myb-like DNA-binding domain 57 102 IPR001005 -
Aed7g0637 296 SUPERFAMILY Homeodomain-like 51 107 IPR009057 -
Aed7g0637 296 SMART sant 56 104 IPR001005 -
Aed7g0637 296 MobiDBLite consensus disorder prediction 191 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0637 Aed-Chr7 4727056 4734390 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aed7g0637 Myb_DNA-binding 4e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0637 - - gmx:100783949 524.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2306 1 19136360 19140468 Aed7g0637 7 4727056 4734390 ECH
Aed7g0637 7 4727056 4734390 Aed7g0637 7 4727056 4734390 ECH