Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0623 ATGTCATCGCCGGGGTTCACTGGCGGCGGTGGTGCGTCTGACTTTTTCGGTGGAGCGGGTGGTTTCGGAGGCAGATCCATTCCTGCGGCCACCATGAACAACCCCAACGCCGCAGCTTCCGCCACCAGCAACCTCCACCCTCTTTACCGAACCCAACAACAACAGAACCTCCCCGCAATGTTTATAGATCCTTCCTCGCAGATCGCCCAACAACGCCAAACACCAACCCTCATCGGTAAACGCACCCTAACTGAATTCCAAACCTTCAACCAAACCAACAACAACCCCAACCACATCCTCTCGAACCTCTTGCTTCGTTCCGTTAAGCCCCGAACCAGTTTTCCTCACAGTTCTATGGACTTTCCCGTTCCCGAATTGCAAAACCAAAACCTTTATGCCAACCCAACGCAGCGTTTTGGTGTTCCGTTACTTCACCAGCTCCGCCCTCAGCCCATTAATCTCCCCAACAACGGGGGGCCTTTACCCATGACAGGCCCAAATTTCGGTTACCGGAACTCCAATTTAGGTTTACCACAGAACCGGGTTCGTGTTTCTCTTCCTCTTCCGGTTCAGGTTCAGTCATCTGAACCGGAAAAGAAGATCATGGACAACCGGCTTCTTGAATTGGAGAAGCAGCTTCTGGAAGATAACGACGAAGAAGGAGAAGCCGATGCTGCGTCTGTGATAACCACCAGCGAGTGGTCCGAGACTTATCAGAATTTAATCAGTCCCGGTCCGGTTCCGAAACCGGTTTTGACGACGTCGCCGACTTCGTCCACGACGTCTTCCACATCATCTTCTTCCTCCGTGGCTTCTCCTGCTTCCGGATGCTCAAAGCAAACGCTCATGGAAGCCGCATCTGCAATTGTTGAAGGGAAACATGATGTTGCGACGGAGATCCTGAACCGGTTGAACGGTGCGAACCGGACTGATAGGTTAACGGATTGCATGGTTGCGGCTTTGAAATCTAGGATGAATCCGGCGGAACATCCGCCGCCGGTGAAGGAGCTTTTCAGCAAGGAGCACGCCGAGTCGACTCAGCTGCTTTTGGAAAACTCGGTGTGCTTCACGGTAGGGTTCACGGCGGCGAATCTCGCGATTCTGGAAGCAGCATTTGAGGAGAAATCGGAGAAGAGCAGGTTCTGCGTGGTGGATTTTGAGATTGGACAGGGAAAGCAATATTTGCTTCTCCTCAACGCGCTCTCGACGCGTGGACAGAACGTGACAGTGAAGATCGCGGCCGTGGCCGTGGCCGAGAACGGCGGCGAGGAGAGAGTGCGCGCCGTTGGAGACATGCTAAGTCTAGTCGCGGAGAGGCAGAGGATCGGGTTCGAGTTTAAAGTCATCGCAACTCAGAAAATCTCCGAGTTGACTCGCGAGTCGTTAGGATGCGACGCGGACGAGGTTCTCGTGGTGAACTTCGCTTTCATGTTGAACAAGATTCCCGACGAGAGCGTCTCCACGGAGAATCCGCGCGACGAGCTTCTTCGGCGCGTGAAGCGCCTCGCGCCGCGCGTGGTGACGGTCGTGGAGCAGGAGATGAACGCGAACACGGCGCCGTTTTTGGCGCGCGTGGCGGAAACGCTGTCGTATTACGGCGCGTTGTTGGAGTCCATTGAGGCCACCACCACGGTGGGGAGGGACAGTAACAATAACTCAGACCGAGTGAGACTCGAGGAGGGACTGAGCCGCAAATTACATAACTCGGTGGCGTGCGAAGGAGGAGATCGCGTGGAACGGTGTGAAGTGTTTGGAAAATGGCGCGCGCGTATGAGCATGGCGGGGTTCGAGTTAAAACCGCTGAGTCAAAGCATGGCCGAGTCAATAAAATCGCGACTCACATCTGCTAACAACCGAGTCATCTCGGGACTCACCGTTAAGGAAGAGAACGGCGGGATTTGCTTTGGTTGGATGGGAAGAACACTCGCAGTCGCATCTGCTTGGCGTTAA 1950 0.5462 MSSPGFTGGGGASDFFGGAGGFGGRSIPAATMNNPNAAASATSNLHPLYRTQQQQNLPAMFIDPSSQIAQQRQTPTLIGKRTLTEFQTFNQTNNNPNHILSNLLLRSVKPRTSFPHSSMDFPVPELQNQNLYANPTQRFGVPLLHQLRPQPINLPNNGGPLPMTGPNFGYRNSNLGLPQNRVRVSLPLPVQVQSSEPEKKIMDNRLLELEKQLLEDNDEEGEADAASVITTSEWSETYQNLISPGPVPKPVLTTSPTSSTTSSTSSSSSVASPASGCSKQTLMEAASAIVEGKHDVATEILNRLNGANRTDRLTDCMVAALKSRMNPAEHPPPVKELFSKEHAESTQLLLENSVCFTVGFTAANLAILEAAFEEKSEKSRFCVVDFEIGQGKQYLLLLNALSTRGQNVTVKIAAVAVAENGGEERVRAVGDMLSLVAERQRIGFEFKVIATQKISELTRESLGCDADEVLVVNFAFMLNKIPDESVSTENPRDELLRRVKRLAPRVVTVVEQEMNANTAPFLARVAETLSYYGALLESIEATTTVGRDSNNNSDRVRLEEGLSRKLHNSVACEGGDRVERCEVFGKWRARMSMAGFELKPLSQSMAESIKSRLTSANNRVISGLTVKEENGGICFGWMGRTLAVASAWR 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0623 649 MobiDBLite consensus disorder prediction 239 276 - -
Aed7g0623 649 MobiDBLite consensus disorder prediction 252 276 - -
Aed7g0623 649 ProSiteProfiles GRAS family profile. 269 649 IPR005202 -
Aed7g0623 649 PANTHER SCARECROW-LIKE PROTEIN 8 72 648 IPR030013 -
Aed7g0623 649 Coils Coil 199 219 - -
Aed7g0623 649 Pfam GRAS domain family 279 649 IPR005202 -
Aed7g0623 649 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 72 648 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0623 Aed-Chr7 4637781 4639730 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0623 49 649 GRAS Transcription Factor Family AT5G52510 48.734 3.27e-156 462
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aed7g0623 GRAS 3.4e-87 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0623 - - gmx:100808172 1001.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0623 7 4637781 4639730 Aed7g0623 7 4637781 4639730 ECH
Aed7g0623 7 4637781 4639730 Aed1g2293 1 19059406 19061169 PCT