Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0591 ATGTCAGAATCCAAGTCAAAGCCACAAGAGGAACATGGGTTTGCCATGGATTTTGACATTGGCCTAGAAAGTCTATGGCCCTTGGATCATGTATCTTTGGTCTCTAACCCCATGTCTCCTTTTCTCTTATCCACTATCTCTGAACAACCTTTTTCTCCAGTCTGGGCTTTTTCTGATGCTGAAGATGAGAGGCAAATATGGATTGCAGCTTCAGGTAATACAAATACAACAACTGAAAATCCAGTTGAAAAAGATGAGAAGAAGAAAACTGTGTCACACCTTGTGGCTCTGCCACTTTCAGAAAATCCAGATGGTCATTGTCTAATCAAGGAAAGAATGACACAAGCGCTTCGCCACTTCAAAGAGTTGACTGAACAGAATGTTCTTGCTCAAGTTTGGGCACCTGTGAGGAATGGAAACCGGTATGCACTTACAACATCAGGTCAACCATTTGTTCTTGATCCACATAGTAATGGACTCCATCAGTATAGAACAGCCTCTCTGATGTATATGTTTTCTGTGGATGGAGAGAATGATGAGATCCTGGGACTTCCCGGTCGAGTTTTTCAGCATAGAATTCCAGAATGGACTCCCAATGTTCAGTATTATTCTAGCAGAGAGTATCAGCGCCTAAATCACGCGCAACATTACAATGTTCGCGGAACCTTGGCCCTGCCTGTGTTTGAGCTTGCAGGACAGTCATGTGTGGCTGTAGTGGAGTTGATAATGACTTCACAGAAGGTTAACTATGCTCCTGAGGTTGATAAAATCTGCAAAGCCCTTGAGGCAGTTGATTTAAGGAGTTCAGAAATTTTGGAGCATCCATACAATCAGATCTGTAATGAAGACCGCCAGTACGCATTAGCCGAGATTTTGGAGATACTGACAGTTGTGTGTGAAACTCATGGTCTGCCTCTGGCACAAACATGGGTTCCGTGTAAGCATCGGAGTGTCTTGGCACATGGTGGTGGCCTTAAGAAAAGTTGCTCTAGTTTTGATGGTTGTTGCATGGGGCAAGTTTGCATGTCTATAACTGAGGTAGCATTCTATGTCATAGATGCTCATACATGGGGTTTCCATGAGGCCTGTGTTGAGCATCACTTACAACAAGGTCAAGGTGTTGCTGGGAGGGCATTTTTGTCCCAGAACATGTGCTTCAGTGGGAACATTATCCAATTCTGCAAAACTGAATATCCCTTGGTACATTATGCTCTCATGTTTGGCTTAACCAGCTGTTTTGCAGTATGCTTACAAAGCTCTCATACAGGAAATGATGAATATGTGCTAGAGTTTTTTCTGCCTTCTAGGATCACAGACTTTAATGAACAGAAGAGATTGTTGGGATCCATATTGGCAACAATGAAGCCACATTTTCAGAGTCTTAAGATTGCTTCTGGTGTTGGTCTTGAGGAGAATGCTTCAATTGAAATTATAGAAGCAAGAAATGAAAGAGTTCATTTGAGGTTTGAGTCCATTCCAATTACTCAATCTTCCAAGTCACCACCAACTAGACATGCCTCACCAAATATGGGGGAGGTACTGCCACTGGAGCCATCAGAACAGAAAATAATGGCATACTTTGATGGCATAAATGATGGAGGGAGTCTCGGTGATAATGCAAGTGGACACATTGATCAGAACACTACTCCCTTAGAGACCAAAACCAAAAAGAAACCCTCAGAGAGAAAACGTGGAAAAGCTGAGAAATGCATTAGTCTTGATGTTTTGCAACATTACTTCACAGGAAGCCTTAAGGATGCTGCAAAGAGCCTTGGTGTTTGCCCTACTACAATGAAGCGCATCTGTAGACAGCATGGGATATTGCGTTGGCCATCCCGAAAGATAAAAAAGGTTAACCGTTCCCTGTCCAAGCTCAAGTGTGTAATTGAATCAGTCCATGGTGCTGAGGGAGCATTTGGTTTGAATTCTCTGAGTACTGGTTCACTTCCCATTGCTGCTGGTTCCTTTTCTGAGCCTTCCACTTCAAACAAGTTTAACCGCCAAACCTCGTTGATCATTAGGCCATCAGAACCTAAGATCAATGAAAATGATTTTAATGCTTCGAGAGTGTTAGAATCAAACAGACAAGCTGGGATGGAAGATCAGTTCCCAGTACTAGGAGCAAAGACACAGAGTCCCGAGAAAGCGATTAATGATAAAGGAGGGGCCATTCATGAAATTGACTCTAAAGGCACAAACAAGTTAAGAACTGGCAGTGGCTCAAGTGAAGGCAGTGCAAATCCTTCTCCTCATGGTTTATGCCAAGGTAGCCCCCCAAATGAATTTTCACCTCCAAAAGATATATATGTAACACTGCACTCAACTAGTACACCAAACCGCGCAATTGCATACCCTGTGCCTCACATTGTGGAAACAACAGAACCTCAAGAACCATTTGGAGGAAAACTACTTGAGAGTGCTGGTAGTTCTAAGGACTTGAGAAATCTATGTCCTTCAGCAGATGCTGTTTTGGAGGATCAGGTTCCAGTGGCTTGCAAGATGAATCCTCAATGTTCTGATTTGGCTCCTGTGCAACACATGGATACTCTTGATAAGACTATGACTACCTTTGCAGTTAGGAAAGAAGTGAAGAGTGTGACTATTAAGGCATCATATAAAGAAGATATCATAAGGTTTAAGGTTTCTTTGAACTGTGGTATTGTGGAATTGAAAGAGGAAATTGCCAAAAGATTGAAACTAGAGGTGGGAACATTTGATATAAAGTATCTTGATGATGATCATGAATGGGTTTTGATAGCCTGTGATGCAGACCTGCAGGAGTGCATGGACATCTCAAGATCATCAGGCTGCAACATAATCAGGCTTGTGGTGCATGATATACTGCCCATTCTTGGAAGCTCTTGTGAGAGCTCAGGAGATTGGAAAGGTTGTACATAG 2898 0.4262 MSESKSKPQEEHGFAMDFDIGLESLWPLDHVSLVSNPMSPFLLSTISEQPFSPVWAFSDAEDERQIWIAASGNTNTTTENPVEKDEKKKTVSHLVALPLSENPDGHCLIKERMTQALRHFKELTEQNVLAQVWAPVRNGNRYALTTSGQPFVLDPHSNGLHQYRTASLMYMFSVDGENDEILGLPGRVFQHRIPEWTPNVQYYSSREYQRLNHAQHYNVRGTLALPVFELAGQSCVAVVELIMTSQKVNYAPEVDKICKALEAVDLRSSEILEHPYNQICNEDRQYALAEILEILTVVCETHGLPLAQTWVPCKHRSVLAHGGGLKKSCSSFDGCCMGQVCMSITEVAFYVIDAHTWGFHEACVEHHLQQGQGVAGRAFLSQNMCFSGNIIQFCKTEYPLVHYALMFGLTSCFAVCLQSSHTGNDEYVLEFFLPSRITDFNEQKRLLGSILATMKPHFQSLKIASGVGLEENASIEIIEARNERVHLRFESIPITQSSKSPPTRHASPNMGEVLPLEPSEQKIMAYFDGINDGGSLGDNASGHIDQNTTPLETKTKKKPSERKRGKAEKCISLDVLQHYFTGSLKDAAKSLGVCPTTMKRICRQHGILRWPSRKIKKVNRSLSKLKCVIESVHGAEGAFGLNSLSTGSLPIAAGSFSEPSTSNKFNRQTSLIIRPSEPKINENDFNASRVLESNRQAGMEDQFPVLGAKTQSPEKAINDKGGAIHEIDSKGTNKLRTGSGSSEGSANPSPHGLCQGSPPNEFSPPKDIYVTLHSTSTPNRAIAYPVPHIVETTEPQEPFGGKLLESAGSSKDLRNLCPSADAVLEDQVPVACKMNPQCSDLAPVQHMDTLDKTMTTFAVRKEVKSVTIKASYKEDIIRFKVSLNCGIVELKEEIAKRLKLEVGTFDIKYLDDDHEWVLIACDADLQECMDISRSSGCNIIRLVVHDILPILGSSCESSGDWKGCT 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0591 965 MobiDBLite consensus disorder prediction 493 513 - -
Aed7g0591 965 ProSiteProfiles RWP-RK domain profile. 555 638 IPR003035 -
Aed7g0591 965 MobiDBLite consensus disorder prediction 708 764 - -
Aed7g0591 965 CDD PB1_NLP 866 946 IPR034891 -
Aed7g0591 965 MobiDBLite consensus disorder prediction 550 565 - -
Aed7g0591 965 MobiDBLite consensus disorder prediction 537 565 - -
Aed7g0591 965 PANTHER PROTEIN NLP8 4 961 IPR045012 GO:0003700
Aed7g0591 965 PANTHER PLANT REGULATOR RWP-RK FAMILY PROTEIN 4 961 - -
Aed7g0591 965 MobiDBLite consensus disorder prediction 733 756 - -
Aed7g0591 965 SUPERFAMILY CAD & PB1 domains 865 950 - -
Aed7g0591 965 Gene3D - 862 949 - -
Aed7g0591 965 SMART PB1_new 865 947 IPR000270 GO:0005515
Aed7g0591 965 Pfam RWP-RK domain 571 618 IPR003035 -
Aed7g0591 965 ProSiteProfiles PB1 domain profile. 865 947 IPR000270 GO:0005515
Aed7g0591 965 Pfam PB1 domain 866 946 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0591 Aed-Chr7 4357536 4362438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0591 243 960 NLP Transcription Factor Family AT4G24020 52.126 0.0 655
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Aed7g0591 PB1 1.1e-18 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0591 - - gmx:100780901 1704.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0591 7 4357536 4362438 Aed1g2276 1 18924079 18929086 PCT